ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0112418
Analysis Project Name Prefix Mycoplasma pneumoniae 5817
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 94135
Completion Status Complete
IMG Completion Date 2016-08-31
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Abyss v. 1.3.7
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 14
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 818
Estimated Size 822703
Sequencing Depth (MIGS-31.1) 150x
Annotation Pipeline IMG Annotation Pipeline v.4.11.4
Added By JGI automated process on 2016-02-19
Last Modified By JGI automated process on 2017-11-21
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2693429769
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID LHQD00000000 (GCA_001296725.1)
Release Date 2015-09-24
NCBI Genbank Version LHQD01
Genbank Release Date 2015-09-24
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of 23 Mycoplasma pneumoniae human isolates
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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