ANALYSIS PROJECT INFORMATION | |
---|---|
GOLD Analysis Project ID
![]() |
Ga0102826 |
Analysis Project Name |
Estuarine microbial communities from the Columbia River estuary - metaG S.737 |
Analysis Project Name Suffix
![]() |
|
Analysis Project Type
![]() |
Metagenome Analysis |
IMG Submission ID
![]() |
84972 |
Completion Status |
Complete |
IMG Completion Date
![]() |
2016-05-21 |
PI | Holly Simon |
Analysis Project Description
![]() |
|
Visibility | Public |
ANALYSIS PROJECT METADATA | |
Assembly Method
(MIGS-30)
![]() |
MEGAHIT v. 1.0.3 |
Scaffold Count
![]() |
3996507 |
Contig Count
![]() |
|
Gene Calling Method
(MIGS-32)
![]() |
|
Gene Count |
3884610 |
Estimated Size |
1140199420 |
Sequencing Depth
(MIGS-31.1)
![]() |
|
Genbank Anomalous Assembly |
|
Genbank Anomalous Reason |
|
Annotation Pipeline |
IMG Annotation Pipeline v.4.11.0 |
Added By | JGI automated process on 2015-12-18 |
Last Modified By | JGI automated process on 2021-11-06 |
ORF Comparison Tools
![]() |
|
PROJECT EXTERNAL REFERENCES | |
IMG Taxon ID
![]() |
3300009054 |
IMG Metagenome bin count |
2 |
IMG Predicted viruses |
78 |
Genbank Accession
![]() |
|
Genbank Release Date |
|
SRA Runs |
|
ANALYSIS PROJECT COMPOSITION | |
Study |
Estuarine microbial communities from the Columbia River estuary, to analyze effect of nutrient fluxes, a time series |
Number of Studies
![]() |
1 |
Number of Biosamples
![]() |
1 |
Number of Projects
![]() |
1 |
Number of Related Analysis Projects
![]() |
2 |
Derived Analysis Projects (DAP)
![]() |
0 |
JGI INFORMATION | |
JGI Data Utilization Status
![]() |
Unrestricted |
ITS Analysis Project ID
![]() |
1091766 (Portal) |
ITS Analysis Project Name
![]() |
Columbia river estuary metaG S.737 |
ITS Analysis Product Name
![]() |
Metagenome Minimal Draft |
ITS Version Number |
1 |
Library Names
![]() |
AUSNW |
JGI Award DOI
![]() |