ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0102078
Analysis Project Name Prefix Yonghaparkia sp. Root332
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 76478
Completion Status Complete
IMG Completion Date 2015-12-11
PI
Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) A5 v. 20140605
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 2
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 2530
Estimated Size 2632343
Sequencing Depth (MIGS-31.1) 300.0x
Annotation Pipeline
Added By JGI automated process on 2015-12-08
Last Modified By JGI automated process on 2017-11-22
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2643221635
Genbank Accession
Genbank ID LMCX00000000 (GCA_001425665.1)
Release Date 2015-11-04
NCBI Genbank Version LMCX01
Assembly Accession GCA_001425665.1
Genbank Release Date 2015-11-04
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Arabidopsis leaf and root microbiota representing the majority of bacterial species in their natural communities
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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