ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0100646
Analysis Project Name Escherichia coli 402559
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 82698
Completion Status Complete
IMG Completion Date 2016-03-23
PI Unknown
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 1.1.04
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 256
Contig Count 288
Gene Calling Method (MIGS-32)
Gene Count 5085
Estimated Size 4962285
Sequencing Depth (MIGS-31.1) 154x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG Annotation Pipeline v.4.10.0
Added By JGI automated process on 2015-11-10
Last Modified By JGI automated process on 2017-11-22
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2657245439
Genbank Accession
Genbank ID JHTH00000000 (GCA_001266385.1)
Release Date 2015-08-20
NCBI Genbank Version JHTH01
Genbank Release Date 2015-08-20
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of Escherichia coli strains - University of Maryland
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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