ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0100556
Analysis Project Name Escherichia coli R811
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 75757
Completion Status Complete
IMG Completion Date 2016-01-05
PI Unknown
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 1.2.08
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 302
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 5629
Estimated Size 5328132
Sequencing Depth (MIGS-31.1) 60x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2015-11-10
Last Modified By JGI automated process on 2017-11-22
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2645727555
Genbank Accession
Genbank ID BBYP00000000 (GCA_001297725.1)
Release Date 2015-10-17
NCBI Genbank Version BBYP01
Genbank Release Date 2015-10-17
ANALYSIS PROJECT COMPOSITION
Study Sequencing of E. coli R811 associated with hemorrhagic colitis of common marmoset
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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