ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0098828
Analysis Project Name Escherichia coli UCD-JA37
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 78675
Completion Status Complete
IMG Completion Date 2016-03-01
PI Unknown
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) A5 v. JUNE-2014
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 151
Contig Count 192
Gene Calling Method (MIGS-32)
Gene Count 5537
Estimated Size 5410123
Sequencing Depth (MIGS-31.1) 84.9x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2015-10-16
Last Modified By JGI automated process on 2016-10-03
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2651869755
Genbank Accession
Genbank ID LJYC00000000 (GCA_001306715.1)
Release Date 2015-10-07
NCBI Genbank Version LJYC01
Genbank Release Date 2015-10-07
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of E. coli strains to study the underlying cause of the severity of sepsis
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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