ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0098825
Analysis Project Name Escherichia coli UCD-JA19
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 75542
Completion Status Complete
IMG Completion Date 2016-01-22
PI
Analysis Project Description Submitting a public genome from NCBI/GenBank to IMG for analysis.
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) A5 v. JUNE-2014
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Scaffold Count 48
Contig Count 64
Gene Calling Method (MIGS-32)
Gene Count 5079
Estimated Size 5191525
Sequencing Depth (MIGS-31.1) 118.8x
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline
Added By JGI automated process on 2015-10-16
Last Modified By JGI automated process on 2016-10-03
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2648501336
Genbank Accession
Genbank ID LJXZ00000000 (GCA_001306585.1)
Release Date 2015-10-07
NCBI Genbank Version LJXZ01
Genbank Release Date 2015-10-07
ANALYSIS PROJECT COMPOSITION
Study Genome sequencing of E. coli strains to study the underlying cause of the severity of sepsis
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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