ANALYSIS PROJECT INFORMATION | |||||||
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GOLD Analysis Project ID
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Ga0098825 |
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Analysis Project Name |
Escherichia coli UCD-JA19 |
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Analysis Project Name Suffix
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|
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Analysis Project Type
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Genome Analysis (Isolate) |
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IMG Submission ID
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75542 | ||||||
Completion Status |
Complete |
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IMG Completion Date
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2016-01-22 |
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PI | Unknown | ||||||
Analysis Project Description
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Submitting a public genome from NCBI/GenBank to IMG for analysis. |
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Visibility | Public | ||||||
ANALYSIS PROJECT METADATA | |||||||
Assembly Method
(MIGS-30)
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A5 v. JUNE-2014 |
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IMG Decontamination
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Yes |
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IMG Decontamination Method
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PhiX decontamination |
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Scaffold Count
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48 |
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Contig Count
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64 |
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Gene Calling Method
(MIGS-32)
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|
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Gene Count |
5079 |
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Estimated Size |
5191525 |
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Sequencing Depth
(MIGS-31.1)
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118.8x |
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Genbank Anomalous Assembly |
No |
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Genbank Anomalous Reason |
|
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Annotation Pipeline |
|
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Added By | JGI automated process on 2015-10-16 | ||||||
Last Modified By | JGI automated process on 2016-10-03 | ||||||
ORF Comparison Tools
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|
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PROJECT EXTERNAL REFERENCES | |||||||
IMG Taxon ID
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2648501336 |
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Genbank Accession
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|
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Genbank Release Date |
2015-10-07 |
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ANALYSIS PROJECT COMPOSITION | |||||||
Study |
Genome sequencing of E. coli strains to study the underlying cause of the severity of sepsis |
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Number of Studies
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1 |
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Number of Projects
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1 |
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Number of Related Analysis Projects
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0 |
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