Studies
|
56,012 |
|
Biosamples
|
183,990 |
|
Sequencing Projects
|
508,091 |
|
Analysis Projects
|
381,521 |
| Organisms | 480,532 |
| ANALYSIS PROJECT INFORMATION | |
|---|---|
|
GOLD Analysis Project ID
|
Ga0077109 |
| Analysis Project Name |
Brackish water microbial communities from Lake Sakinaw in Canada: eDNA_2 (120m) v2 |
| Analysis Project Name Stem |
Brackish water microbial communities from Lake Sakinaw in Canada: eDNA_2 (120m) |
|
Analysis Project Name Suffix
|
v2 |
|
Analysis Project Type
|
Metagenome Analysis |
|
IMG Submission ID
|
67377 |
| Completion Status |
Complete |
|
IMG Completion Date
|
2015-08-29 |
| PI | Tanja Woyke |
|
Analysis Project Description
|
This metagenome from old (Oracle) system is being reannoated to move it into the new system. Replacing 2263328000. |
| Visibility | Public |
| ANALYSIS PROJECT METADATA | |
|
Assembly Method
(MIGS-30)
|
Unknown |
|
Scaffold Count
|
619713 |
|
Contig Count
|
|
|
Gene Calling Method
(MIGS-32)
|
|
| Gene Count |
981047 |
| Estimated Size |
436324495 |
|
Sequencing Depth
(MIGS-31.1)
|
|
| Genbank Anomalous Assembly |
|
| Genbank Anomalous Reason |
|
| Annotation Pipeline |
|
| Added By | Supratim Mukherjee on 2015-07-01 |
| Last Modified By | JGI automated process on 2023-01-30 |
|
ORF Comparison Tools
|
|
| PROJECT EXTERNAL REFERENCES | |
|
IMG Taxon ID
|
3300005645 |
| IMG Metagenome bin count |
20 |
| IMG Predicted viruses |
97 |
|
Genbank Accession
|
|
| Genbank Release Date |
|
| SRA Runs |
|
| ANALYSIS PROJECT COMPOSITION | |
| Study |
Brackish water microbial communities from Lake Sakinaw,Canada |
|
Number of Studies
|
1 |
|
Number of Biosamples
|
1 |
|
Number of Projects
|
1 |
|
Number of Related Analysis Projects
|
1 |
|
Derived Analysis Projects (DAP)
|
0 |
| JGI INFORMATION | |
|
JGI Data Utilization Status
|
Unrestricted |
|
ITS Analysis Project ID
|
1362674 (Portal) |
|
ITS Analysis Project Name
|
Brackish water microbial communities from Lake Sakinaw in Canada: eDNA_2 (120m) v2 |
|
ITS Analysis Product Name
|
Metagenome Standard Draft |
| ITS Version Number |
2 |
|
JGI Award DOI
|
10.46936/10.25585/60007503 |
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