ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0074019
Analysis Project Name Prefix Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 7
Analysis Project Name Suffix
Analysis Project Type Metatranscriptome Analysis
IMG Submission ID 200722
Completion Status Complete
IMG Completion Date 2018-10-28
PI Francis M. Martin
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 0.2.0
Scaffold Count 1230362
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1253580
Estimated Size 522132097
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By JGI automated process on 2015-05-29
Last Modified By JGI automated process on 2020-12-06
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300030999
IMG RNA-Seq ID
Genbank Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Forest soil microbial communities from France, Sweden, Spain and USA, for metatranscriptomics studies
Number of Studies 1
Number of Biosamples 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
ITS Analysis Project ID 1068116 (Portal)
ITS Analysis Project Name Forest Soil Metatranscriptomics Site 2 - LB 7
ITS Analysis Product Name Eukaryote Community Metatranscriptome
ITS Version Number 1

 

 

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