ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0066283
Analysis Project Name Prefix Epsilonproteobacteria bacterium SCGC AD-311-O03
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 72826
Completion Status Complete
IMG Completion Date 2015-10-20
PI Steven Hallam
Analysis Project Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.0.0
IMG Decontamination
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 48
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 920
Estimated Size 869411
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By JGI automated process on 2015-02-24
Last Modified By JGI automated process on 2021-03-14
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2636416008
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Single-cell microbial genomes from expanding oxygen minimum zones (OMZs) of the northeastern subarctic Pacific Ocean (NESAP)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 2
JGI INFORMATION
ITS Analysis Project ID 1062212 (Portal)
ITS Analysis Project Name Epsilonproteobacteria bacterium SCGC AD-311-O03 Screened Assembly
ITS Analysis Product Name Microbial Minimal Draft Single Cell Screened Genome
ITS Version Number 1

 

 

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