ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0061016
Analysis Project Name Prefix Coassembly of Cow Y Switchgrass
Analysis Project Name Suffix
Analysis Project Type Combined Assembly
IMG Submission ID 200621
NCBI BioProject ID
NCBI BioProject Accession
NCBI BioSample Accession
Completion Status Complete
Completion Date 2018-10-25
PI Matthias Hess
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) megahit v. 0.2.0
IMG Decontamination
IMG Decontamination Method
GenePRIMP
Scaffold Count 1819007
Contig Count
Gene Calling Method (MIGS-32)
Gene Count 1879895
Estimated Size 788163767
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.16.5
Added By Matthias Hess on 2014-06-05
Last Modified By JGI automated process on 2019-05-05
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 3300030771
IMG RNA-Seq ID
Genbank
Assembly Accession
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Fungi-associated bovine rumen microbial communities from the University of Illinois at Urbana-Champaign, USA, for metatranscriptome analysis
Number of Studies 1
Number of Biosamples 3
Number of Projects 3
Derived Analysis Projects 6
JGI INFORMATION
ITS Analysis Project ID 1053684 (Portal)
ITS Analysis Project Name Coassembly of Cow Y Switchgrass
ITS Analysis Product Name Combined Assembly
ITS NCBI Taxon ID
ITS Version Number 1

 

 

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