ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0058687
Analysis Project Name Prefix Pseudomonas nitroreducens DPB
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID 78044
Completion Status Complete
IMG Completion Date 2016-01-22
PI Kostas Konstantinidis
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Velvet v. 2011
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
GenePRIMP
Scaffold Count 555
Contig Count 579
Gene Calling Method (MIGS-32)
Gene Count 8531
Estimated Size 6918984
Sequencing Depth (MIGS-31.1) 30x
Annotation Pipeline
Added By Jyothi Mallajosyula on 2014-09-14
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2648501913
IMG RNA-Seq ID
Genbank
Genbank ID JNFO00000000 (GCA_000733635.1)
Assembly Accession GCA_000733635.1
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Freshwater sediment microbial communities from Calcasieu River, Louisiana, USA
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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