Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |||||||||
|---|---|---|---|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0031374 |
||||||||
| Analysis Project Name |
Tsukamurella paurometabola 33, DSM 20162 |
||||||||
|
Analysis Project Name Suffix
|
|
||||||||
|
Analysis Project Type
|
Genome Analysis (Isolate) |
||||||||
|
IMG Submission ID
|
|||||||||
| Completion Status |
Complete |
||||||||
|
IMG Completion Date
|
2010-06-24 |
||||||||
| PI | Jonathan Eisen | ||||||||
|
Analysis Project Description
|
|
||||||||
| Visibility | Public | ||||||||
| ANALYSIS PROJECT METADATA | |||||||||
|
Assembly Method
(MIGS-30)
|
Newbler v. 1.1.02.15, Phrap v. 4.24 SPS |
||||||||
|
IMG Decontamination
|
No |
||||||||
|
IMG Decontamination Method
|
|
||||||||
|
Scaffold Count
|
2 |
||||||||
|
Contig Count
|
|
||||||||
|
Gene Calling Method
(MIGS-32)
|
Prodigal 1.4, GenePRIMP |
||||||||
| Gene Count |
4391 |
||||||||
| Estimated Size |
4479724 |
||||||||
|
Sequencing Depth
(MIGS-31.1)
|
8.25x Sanger, 37.9x pyrosequence |
||||||||
| Genbank Anomalous Assembly |
No |
||||||||
| Genbank Anomalous Reason |
|
||||||||
| Annotation Pipeline |
IMG/W 3.2 |
||||||||
| Added By | Jonathan Eisen on 2007-11-27 | ||||||||
| Last Modified By | JGI automated process on 2023-05-12 | ||||||||
|
ORF Comparison Tools
|
|
||||||||
| PROJECT EXTERNAL REFERENCES | |||||||||
|
IMG Taxon ID
|
646564587 |
||||||||
|
Genbank Accession
|
|
||||||||
| Genbank Release Date |
2013-12-11 |
||||||||
| ANALYSIS PROJECT COMPOSITION | |||||||||
| Study |
A Genomic Encyclopedia of Bacteria and Archaea (GEBA) |
||||||||
|
Number of Studies
|
1 |
||||||||
|
Number of Projects
|
1 |
||||||||
|
Number of Related Analysis Projects
|
0 |
||||||||
| JGI INFORMATION | |||||||||
|
JGI Data Utilization Status
|
Unrestricted |
||||||||
|
ITS Analysis Project ID
|
1377438 (Portal) |
||||||||
|
ITS Analysis Project Name
|
Tsukamurella paurometabola 33, DSM 20162 |
||||||||
|
ITS Analysis Product Name
|
Microbial Minimal Draft Isolate Genome |
||||||||
| ITS Version Number |
1 |
||||||||
|
Library Names
|
|
||||||||
|
JGI Award DOI
|
10.46936/10.25585/60007482 |
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