Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |||||
|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0031359 |
||||
| Analysis Project Name |
Treponema brennaborense DD5/3, DSM 12168 |
||||
|
Analysis Project Name Suffix
|
|
||||
|
Analysis Project Type
|
Genome Analysis (Isolate) |
||||
|
IMG Submission ID
|
|||||
| Completion Status |
Complete |
||||
|
IMG Completion Date
|
2011-08-22 |
||||
| PI | Jonathan Eisen | ||||
|
Analysis Project Description
|
|
||||
| Visibility | Public | ||||
| ANALYSIS PROJECT METADATA | |||||
|
Assembly Method
(MIGS-30)
|
Velvet v. 1.1.04 |
||||
|
IMG Decontamination
|
No |
||||
|
IMG Decontamination Method
|
|
||||
|
Scaffold Count
|
1 |
||||
|
Contig Count
|
|
||||
|
Gene Calling Method
(MIGS-32)
|
Prodigal 1.4, GenePRIMP |
||||
| Gene Count |
2648 |
||||
| Estimated Size |
3055580 |
||||
|
Sequencing Depth
(MIGS-31.1)
|
|
||||
| Genbank Anomalous Assembly |
No |
||||
| Genbank Anomalous Reason |
|
||||
| Annotation Pipeline |
IMG/W 3.5 |
||||
| Added By | Jonathan Eisen on 2009-10-05 | ||||
| Last Modified By | Supratim Mukherjee on 2023-05-31 | ||||
|
ORF Comparison Tools
|
|
||||
| PROJECT EXTERNAL REFERENCES | |||||
|
IMG Taxon ID
|
650716100 |
||||
|
Genbank Accession
|
|
||||
| Genbank Release Date |
2013-07-06 |
||||
| ANALYSIS PROJECT COMPOSITION | |||||
| Study |
A Genomic Encyclopedia of Bacteria and Archaea (GEBA) |
||||
|
Number of Studies
|
1 |
||||
|
Number of Projects
|
1 |
||||
|
Number of Related Analysis Projects
|
0 |
||||
| JGI INFORMATION | |||||
|
JGI Data Utilization Status
|
Unrestricted |
||||
|
ITS Analysis Project ID
|
1377719 (Portal) |
||||
|
ITS Analysis Project Name
|
Treponema brennaborense DD5/3, DSM 12168 |
||||
|
ITS Analysis Product Name
|
Microbial Minimal Draft Isolate Genome |
||||
| ITS Version Number |
1 |
||||
|
Library Names
|
|
||||
|
JGI Award DOI
|
10.46936/10.25585/60007482 |
||||
You are going to add the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
You are going to remove permissions for the following user to your analysis project, project, biosample and study.
Contact Name/Email: Do you want to continue?
Changing the AP visibility will also change visibility on the following items:
Do you want to continue with this visibility change?
Changing the AP visibility will also change downgrade visibility on the following items:
Do you want to continue with this visibility change?
