ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0031151
Analysis Project Name Prefix Syntrophothermus lipocalidus DSM 12680
Analysis Project Name Suffix
Analysis Project Type Genome Analysis
IMG Submission ID
Completion Status Complete
IMG Completion Date 2010-06-24
PI Jonathan Eisen
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.1 PreRelease-4/28/2009, Velvet v. 1.1.04, Phrap v. 4.24 SPS
IMG Decontamination No
IMG Decontamination Method
GenePRIMP Yes
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32) Prodigal 1.4, GenePRIMP
Gene Count 2440
Estimated Size 2405559
Sequencing Depth (MIGS-31.1) 103.3x pyrosequence, 81.3x Illumina
Annotation Pipeline IMG/W 3.2
Added By Jonathan Eisen on 2009-01-18
Last Modified By
Non-SP-Owner AP No
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 646564577
IMG RNA-Seq ID
Genbank Accession
Genbank ID CP002048 (GCA_000092405.1)
Release Date 2014-01-28
Assembly Accession GCA_000092405.1
Genbank Release Date 2014-01-28
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
Derived Analysis Projects 0

 

 

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