ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0031151
Analysis Project Name Syntrophothermus lipocalidus DSM 12680
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID
Completion Status Complete
IMG Completion Date 2010-06-24
PI Jonathan Eisen
Analysis Project Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) Newbler v. 2.1 PreRelease-4/28/2009, Velvet v. 1.1.04, Phrap v. 4.24 SPS
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 1
Contig Count
Gene Calling Method (MIGS-32) Prodigal 1.4, GenePRIMP
Gene Count 2440
Estimated Size 2405559
Sequencing Depth (MIGS-31.1) 103.3x pyrosequence, 81.3x Illumina
Genbank Anomalous Assembly No
Genbank Anomalous Reason
Annotation Pipeline IMG/W 3.2
Added By Jonathan Eisen on 2009-01-18
Last Modified By JGI automated process on 2023-05-12
ORF Comparison Tools
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 646564577
Genbank Accession
Genbank ID CP002048 (GCA_000092405.1)
Release Date 2014-01-28
Genbank Release Date 2014-01-28
ANALYSIS PROJECT COMPOSITION
Study A Genomic Encyclopedia of Bacteria and Archaea (GEBA)
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
JGI Data Utilization Status Unrestricted
ITS Analysis Project ID 1377450 (Portal)
ITS Analysis Project Name Syntrophothermus lipocalidus DSM 12680
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1
Library Names
JGI Award DOI