Studies
|
56,334 |
|
Biosamples
|
196,988 |
|
Sequencing Projects
|
525,360 |
|
Analysis Projects
|
384,991 |
| Organisms | 484,221 |
| ANALYSIS PROJECT INFORMATION | |||||
|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0030354 |
||||
| Analysis Project Name |
Stackebrandtia nassauensis LLR-40K-21, DSM 44728 |
||||
|
Analysis Project Name Suffix
|
|
||||
|
Analysis Project Type
|
Genome Analysis (Isolate) |
||||
|
IMG Submission ID
|
|||||
| Completion Status |
Complete |
||||
|
IMG Completion Date
|
2010-06-24 |
||||
| PI | Jonathan Eisen | ||||
|
Analysis Project Description
|
|
||||
| Visibility | Public | ||||
| ANALYSIS PROJECT METADATA | |||||
|
Assembly Method
(MIGS-30)
|
Newbler v. 1.1.02.15, Phrap v. 4.24 SPS |
||||
|
IMG Decontamination
|
No |
||||
|
IMG Decontamination Method
|
|
||||
|
Scaffold Count
|
1 |
||||
|
Contig Count
|
|
||||
|
Gene Calling Method
(MIGS-32)
|
Prodigal 1.4, GenePRIMP |
||||
| Gene Count |
6541 |
||||
| Estimated Size |
6841557 |
||||
|
Sequencing Depth
(MIGS-31.1)
|
11x Sanger; 29x 454 |
||||
| Genbank Anomalous Assembly |
No |
||||
| Genbank Anomalous Reason |
|
||||
| Annotation Pipeline |
IMG/W 3.2 |
||||
| Added By | Jonathan Eisen on 2007-11-27 | ||||
| Last Modified By | JGI automated process on 2023-05-12 | ||||
|
ORF Comparison Tools
|
|
||||
| PROJECT EXTERNAL REFERENCES | |||||
|
IMG Taxon ID
|
646564571 |
||||
|
Genbank Accession
|
|
||||
| Genbank Release Date |
2014-01-28 |
||||
| ANALYSIS PROJECT COMPOSITION | |||||
| Study |
A Genomic Encyclopedia of Bacteria and Archaea (GEBA) |
||||
|
Number of Studies
|
1 |
||||
|
Number of Projects
|
1 |
||||
|
Number of Related Analysis Projects
|
0 |
||||
| JGI INFORMATION | |||||
|
JGI Data Utilization Status
|
Unrestricted |
||||
|
ITS Analysis Project ID
|
1377525 (Portal) |
||||
|
ITS Analysis Project Name
|
Stackebrandtia nassauensis LLR-40K-21, DSM 44728 |
||||
|
ITS Analysis Product Name
|
Microbial Minimal Draft Isolate Genome |
||||
| ITS Version Number |
1 |
||||
|
Library Names
|
|
||||
|
JGI Award DOI
|
10.46936/10.25585/60007482 |
||||
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