ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0026656
Analysis Project Name Prefix Candidatus Pelagibacter ubique HIMB058
Analysis Project Name Suffix (unscreened)
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 10456
Completion Status Complete
IMG Completion Date 2012-09-30
PI Stephen Giovannoni
Analysis Project Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ALLPATHS v. R37654
IMG Decontamination No
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 59
Contig Count 59
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 1269
Estimated Size 1115049
Sequencing Depth (MIGS-31.1)
Annotation Pipeline
Added By Stephen Giovannoni on 2012-01-27
Last Modified By Supratim Mukherjee on 2017-03-01
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2265129005
IMG Metagenome bin count
IMG Predicted viruses
Genbank Accession
Genbank ID ATTF00000000 (GCA_000419545.1)
Release Date 2014-06-12
NCBI Genbank Version ATTF01
Genbank Release Date 2014-06-12
ANALYSIS PROJECT COMPOSITION
Study SAR11 Genome Evolution
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0

 

 

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