Studies
|
56,011 |
|
Biosamples
|
183,990 |
|
Sequencing Projects
|
508,073 |
|
Analysis Projects
|
381,503 |
| Organisms | 480,513 |
| ANALYSIS PROJECT INFORMATION | |||||||
|---|---|---|---|---|---|---|---|
|
GOLD Analysis Project ID
|
Ga0025009 |
||||||
| Analysis Project Name |
Rubrobacter radiotolerans DSM 5868 |
||||||
|
Analysis Project Name Suffix
|
|
||||||
|
Analysis Project Type
|
Genome Analysis (Isolate) |
||||||
|
IMG Submission ID
|
2778 | ||||||
| Completion Status |
Complete |
||||||
|
IMG Completion Date
|
2011-05-21 |
||||||
| PI | Jonathan Eisen | ||||||
|
Analysis Project Description
|
|
||||||
| Visibility | Public | ||||||
| ANALYSIS PROJECT METADATA | |||||||
|
Assembly Method
(MIGS-30)
|
VELVET, Newbler, parallel phrap |
||||||
|
IMG Decontamination
|
No |
||||||
|
IMG Decontamination Method
|
|
||||||
|
Scaffold Count
|
4 |
||||||
|
Contig Count
|
|
||||||
|
Gene Calling Method
(MIGS-32)
|
Prodigal 1.4, GenePRIMP |
||||||
| Gene Count |
3317 |
||||||
| Estimated Size |
3398074 |
||||||
|
Sequencing Depth
(MIGS-31.1)
|
46.6x |
||||||
| Genbank Anomalous Assembly |
No |
||||||
| Genbank Anomalous Reason |
|
||||||
| Annotation Pipeline |
|
||||||
| Added By | Jonathan Eisen on 2009-01-18 | ||||||
| Last Modified By | JGI automated process on 2023-01-13 | ||||||
|
ORF Comparison Tools
|
|
||||||
| PROJECT EXTERNAL REFERENCES | |||||||
|
IMG Taxon ID
|
2505679031 |
||||||
|
Genbank Accession
|
|
||||||
| Genbank Release Date |
2017-04-17 |
||||||
| ANALYSIS PROJECT COMPOSITION | |||||||
| Study |
A Genomic Encyclopedia of Bacteria and Archaea (GEBA) |
||||||
|
Number of Studies
|
1 |
||||||
|
Number of Projects
|
1 |
||||||
|
Number of Related Analysis Projects
|
0 |
||||||
| JGI INFORMATION | |||||||
|
JGI Data Utilization Status
|
Unrestricted |
||||||
|
ITS Analysis Project ID
|
1377418 (Portal) |
||||||
|
ITS Analysis Project Name
|
Rubrobacter radiotolerans DSM 5868 |
||||||
|
ITS Analysis Product Name
|
Microbial Minimal Draft Isolate Genome |
||||||
| ITS Version Number |
1 |
||||||
|
JGI Award DOI
|
10.46936/10.25585/60007482 |
||||||
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