ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0016553
Analysis Project Name Marine Group A AB-746_N13AB-902 (unscreened)
Analysis Project Name Stem Marine Group A AB-746_N13AB-902
Analysis Project Name Suffix (unscreened)
Analysis Project Type Single Cell Analysis (unscreened)
IMG Submission ID 19950
Completion Status Complete
IMG Completion Date 2013-09-06
PI Steven J. Hallam
Analysis Project Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) IDBA-UD v. 1.1.0, ALLPATHS-LG v. R42328
IMG Decontamination No
IMG Decontamination Method
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 72
Contig Count
Gene Calling Method (MIGS-32) Prodigal, Jigsaw pipeline v. 2.1.1 2013-01-17
Gene Count 1882
Estimated Size 1899548
Sequencing Depth (MIGS-31.1)
Genbank Anomalous Assembly
Genbank Anomalous Reason
Annotation Pipeline
Added By Jody Wright on 2013-02-13
Last Modified By JGI automated process on 2017-06-13
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2537562244
Genbank Accession
Genbank Release Date
ANALYSIS PROJECT COMPOSITION
Study Microbial Systems Ecology of Expanding Oxygen Minimum Zones in the Eastern Subtropical North Pacific Ocean
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1

 

 

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