ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0008703
Analysis Project Name Prefix Nitriliruptor alkaliphilus JGI ETNP_125m_186_E06
Analysis Project Name Suffix
Analysis Project Type Single Cell Analysis (screened)
IMG Submission ID 101337
Completion Status Complete
IMG Completion Date 2016-11-22
PI Frank Stewart
Description
Contamination Screening Method
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) spades v. 3.9.0
IMG Decontamination Yes
IMG Decontamination Method PhiX decontamination
Number of tRNAs
tRNA Software
Completeness Strategy
Scaffold Count 44
Contig Count
Gene Calling Method (MIGS-32) Prodigal version 2.5
Gene Count 684
Estimated Size 631170
Sequencing Depth (MIGS-31.1)
Annotation Pipeline IMG Annotation Pipeline v.4.12.2
Added By Frank Stewart on 2014-04-17
Last Modified By JGI automated process on 2019-05-03
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2706794825
Genbank Accession
Assembly Accession
Genbank Release Date
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Microbial and viral regulation of community carbon cycling across diverse low-oxygen zones
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 1
JGI INFORMATION
ITS Analysis Project ID 1039901 (Portal)
ITS Analysis Project Name Nitriliruptor alkaliphilus JGI ETNP_125m_186_E06 Screened
ITS Analysis Product Name Microbial Minimal Draft Single Cell Screened Genome
ITS Version Number 1

 

 

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