ANALYSIS PROJECT INFORMATION
GOLD Analysis Project ID Ga0004326
Analysis Project Name Prefix Polaromonas sp. UNC47MFTsu3.1
Analysis Project Name Suffix
Analysis Project Type Genome Analysis (Isolate)
IMG Submission ID 72924
Completion Status Complete
IMG Completion Date 2015-10-20
PI Jeff Dangl
Description
Visibility Public
ANALYSIS PROJECT METADATA
Assembly Method (MIGS-30) ALLPATHS v. r46652
IMG Decontamination No
IMG Decontamination Method
Scaffold Count 26
Contig Count
Gene Calling Method (MIGS-32) Prodigal 2.5
Gene Count 4776
Estimated Size 5072534
Sequencing Depth (MIGS-31.1) 212x
Annotation Pipeline
Added By Jeff Dangl on 2013-04-10
Last Modified By JGI automated process on 2019-05-02
Non-SP-Owner AP No
ORF Comparison Tools
16S Recovered
16S Recovery Software
PROJECT EXTERNAL REFERENCES
IMG Taxon ID 2636416056
Genbank Accession
Genbank ID FNHX00000000 (GCA_900103405.1)
Release Date 2017-04-13
NCBI Genbank Version FNHX01
Assembly Accession GCA_900103405.1
Genbank Release Date 2017-04-13
SRA Runs
ANALYSIS PROJECT COMPOSITION
Study Plant associated metagenomes--Microbial community diversity and host control of community assembly across model and emerging plant ecological genomics systems.
Number of Studies 1
Number of Projects 1
Number of Related Analysis Projects 0
JGI INFORMATION
ITS Analysis Project ID 1020651 (Portal)
ITS Analysis Project Name Polaromonas sp. UNC47MFTsu3.1
ITS Analysis Product Name Microbial Minimal Draft Isolate Genome
ITS Version Number 1

 

 

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