Studies
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49,623 |
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Biosamples
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133,250 |
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Sequencing Projects
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410,882 |
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Analysis Projects
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321,341 |
| Organisms | 410,938 |
| Biosamples: 29 Seq. Projects: 29 | |
| STUDY INFORMATION | |
|---|---|
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GOLD Study ID
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Gs0153945 |
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Study Name
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Floating fern leaf microbial communities from various locations |
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Other Names
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| NCBI Umbrella Bioproject Name |
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| NCBI Umbrella Bioproject ID |
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| SRA Studies |
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Legacy ER Study ID
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Legacy GOLD ID
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| Added By |
JGI automated process
on 2021-04-01 |
| Last Modified By | |
| PI | David Armitage |
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Description
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The objectives of this study are: 1) To characterize the compositional variation and specificity of bacterial endophytes across all extant Azolla species. 2) To assess whether hosts and their endophytes show evolutionary congruence consistent with co-speciation. 3) To identify shared or convergent genomic signatures of adaptation to a completely endophytic lifestyle (e.g., gene loss, fragmentation, horizontal transfer). |
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Relevance
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Study Information Link
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Study Information Visibility
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Public |
| Metagenomic Study |
Yes |
| Publication |
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| Is GEBA |
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| Is HMP |
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ECOSYSTEM CLASSIFICATION
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| Ecosystem |
Host-associated |
| Ecosystem Category |
Plants |
| Ecosystem Type |
Phyllosphere |
| Ecosystem Subtype |
Leaf |
| Specific Ecosystem |
Endophytes |
| STUDY COMPOSITION | |
| Number of Biosamples |
29 |
| Number of Organisms | 0 |
| Number of Seq Projects |
29 |
| Number of Analysis Projects |
29 |
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Number of Related Studies
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0 |
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