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Study

Study Name: Floating fern leaf microbial communities from various locations

Projects

Biosamples

Organisms

Biosamples: 29 Seq. Projects: 29
STUDY INFORMATION
GOLD Study ID Gs0153945
Study Name Floating fern leaf microbial communities from various locations
Other Names
NCBI Umbrella Bioproject Name
NCBI Umbrella Bioproject ID
SRA Studies
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2021-04-01
Last Modified By
PI David Armitage
Description The objectives of this study are: 1) To characterize the compositional variation and specificity of bacterial endophytes across all extant Azolla species. 2) To assess whether hosts and their endophytes show evolutionary congruence consistent with co-speciation. 3) To identify shared or convergent genomic signatures of adaptation to a completely endophytic lifestyle (e.g., gene loss, fragmentation, horizontal transfer).
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Host-associated
Ecosystem Category Plants
Ecosystem Type Phyllosphere
Ecosystem Subtype Leaf
Specific Ecosystem Endophytes
STUDY COMPOSITION
Number of Biosamples 29
Number of Organisms 0
Number of Seq Projects 29
Number of Analysis Projects 29
Number of Related Studies 0

 

 

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