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Study

Study Name: Terrestrial cyanobacterial communities with co-occurring heterotrophs from various environments and locations

Projects

Biosamples

Organisms

Biosamples: 64 Seq. Projects: 64
STUDY INFORMATION
GOLD Study ID Gs0141841
Study Name Terrestrial cyanobacterial communities with co-occurring heterotrophs from various environments and locations
Other Names
NCBI Umbrella Bioproject Name Metagenomes of cyanobacteria and their associated microbial communities from various terrestrial environments
NCBI Umbrella Bioproject ID 688935
SRA Studies
SRA Study Id SRP274234  (Link to NCBI )
Study Title Rock surface microbial communities from Grand Staircase-escalante National Monument, Utah, United States - 20190225_38 metagenome
Study Abstract
  
SRA Study Id SRP274235  (Link to NCBI )
Study Title Soil crust microbial communities from Mojave Desert, Joshua Tree National Park, California, United States - 20190201_42 metagenome
Study Abstract
  
SRA Study Id SRP274230  (Link to NCBI )
Study Title Soil microbial communities from Clark Mountains, San Bernardino, California, United States - 20190125_33 metagenome
Study Abstract
  
SRA Study Id SRP274198  (Link to NCBI )
Study Title Underwater plant surface microbial communities from South Carolina, United States - 20190130_2 metagenome
Study Abstract
  
SRA Study Id SRP296741  (Link to NCBI )
Study Title Rock surface microbial communities from Maniniholo Cave, near Haena, Kauai, HI, United States - 20190625_3 metagenome
Study Abstract
  
SRA Study Id SRP259797  (Link to NCBI )
Study Title Soil microbial communities from Atacama Desert, Chile - 20181105_1A metagenome
Study Abstract
  
SRA Study Id SRP296748  (Link to NCBI )
Study Title Sandstone microbial communities from Lower Calf Creek Falls, Grand Staircase Escalante National Monument, UT, United States - 20190625_44 metagenome
Study Abstract
  
SRA Study Id SRP290118  (Link to NCBI )
Study Title Cyanobacterial mat microbial communities from Theobald House, Kauai, HI, United States - 20190625_25 metagenome
Study Abstract
  
SRA Study Id SRP274239  (Link to NCBI )
Study Title Cement wall surface microbial communities from Nuuanu Pali Lookout, Hawaii, United States - 20190126_45 metagenome
Study Abstract
  
SRA Study Id SRP296749  (Link to NCBI )
Study Title Desert soil microbial communities from Mojave Desert, CA, United States - 20190806_62D metagenome
Study Abstract
  
SRA Study Id SRP259795  (Link to NCBI )
Study Title Rock surface microbial communities from Grand Staircase Escalante National Monument, Utah, United States - 20181105_13A metagenome
Study Abstract
  
SRA Study Id SRP259796  (Link to NCBI )
Study Title Cave wall surface microbial communities from Maniniholo Cave, Kauai, Hawaii, United States - 20181031_20A metagenome
Study Abstract
  
SRA Study Id SRP259793  (Link to NCBI )
Study Title Rock surface microbial communities from Grand Staircase Escalante National Monument, Utah, United States - 20181031_5A metagenome
Study Abstract
  
SRA Study Id SRP290121  (Link to NCBI )
Study Title Stone wall microbial communities from Great Smoky National Park, Tennessee, United States - 20190605_46C metagenome
Study Abstract
  
SRA Study Id SRP259807  (Link to NCBI )
Study Title Soil microbial communities from Atacama Desert, Chile - 20181128_60 metagenome
Study Abstract
  
SRA Study Id SRP259808  (Link to NCBI )
Study Title Soil microbial communities from Atacama Desert, Chile - 20181123_31 metagenome
Study Abstract
  
SRA Study Id SRP259805  (Link to NCBI )
Study Title Soil microbial communities from Clark Mountains, San Bernardino, California, United States - 20181120_34 metagenome
Study Abstract
  
SRA Study Id SRP296751  (Link to NCBI )
Study Title Desert soil microbial communities from Joshua Tree National Park, Colorado Desert, CA, United States - 20190326_41F metagenome
Study Abstract
  
SRA Study Id SRP296750  (Link to NCBI )
Study Title Desert soil microbial communities from Joshua Tree National Park, Colorado Desert, CA, United States - 20190301_28A metagenome
Study Abstract
  
SRA Study Id SRP259800  (Link to NCBI )
Study Title Cave wall surface microbial communities from Makauwahi Cave, Kauai, Hawaii, United States - 20181107_10A metagenome
Study Abstract
  
SRA Study Id SRP284490  (Link to NCBI )
Study Title Rock surface microbial communities from Slovak Paradise National Park, Hrabusice, Kosice Region, Slovakia - 20190130_56 metagenome
Study Abstract
  
SRA Study Id SRP274227  (Link to NCBI )
Study Title Soil microbial communities from Maunawili Falls, Hawaii, United States - 20190125_22 metagenome
Study Abstract
  
SRA Study Id SRP259804  (Link to NCBI )
Study Title Soil microbial communities from Fort Irwin, California, United States - 20181109_37A metagenome
Study Abstract
  
SRA Study Id SRP259801  (Link to NCBI )
Study Title Rock surface microbial communities from Grand Staircase Escalante National Monument, Utah, United States - 20181109_4A metagenome
Study Abstract
  
SRA Study Id SRP259802  (Link to NCBI )
Study Title Rock surface microbial communities from Grand Staircase Escalante National Monument, Utah, United States - 20181105_59A metagenome
Study Abstract
  
SRA Study Id SRP297694  (Link to NCBI )
Study Title Soil microbial communities from Kaiparowits Plateau, Grand Staircase Escalante National Monument, UT, United states - 20190625_23 National Monument, UT, United states - 20190625_23 metagenome
Study Abstract
  
SRA Study Id SRP259818  (Link to NCBI )
Study Title Soil microbial communities from Joshua Tree National Park, Mojave Desert, California, United States - 20181207_30 metagenome
Study Abstract
  
SRA Study Id SRP259819  (Link to NCBI )
Study Title Soil microbial communities from City of Most, Zurich, Switzerland - 20181212_18i metagenome
Study Abstract
  
SRA Study Id SRP274256  (Link to NCBI )
Study Title Soil microbial communities from Central Plains Experimental Range, Colorado, United States - 20190111_54 metagenome
Study Abstract
  
SRA Study Id SRP274214  (Link to NCBI )
Study Title Rock surface microbial communities from Slovak Paradise National Park, Hrabusice, Kosice Region, Slovakia - 20190125_17 metagenome
Study Abstract
  
SRA Study Id SRP259817  (Link to NCBI )
Study Title Rock surface microbial communities from Grand Staircase Escalante National Monument, Utah, United States - 20181204_58 metagenome
Study Abstract
  
SRA Study Id SRP297693  (Link to NCBI )
Study Title Granitic soil microbial communities from Pinto Wells, Joshua Tree National Park, Colorado Desert, CA, United States - 20190625_52 metagenome
Study Abstract
  
SRA Study Id SRP274253  (Link to NCBI )
Study Title Cave wall surface microbial communities from Waikapalae Cave, Hawaii, United States - 20190126_53 metagenome
Study Abstract
  
SRA Study Id SRP259810  (Link to NCBI )
Study Title Surface water microbial communities from Lunzer Lake, Lower Austria, Austria - 20181204_36 metagenome
Study Abstract
  
SRA Study Id SRP259811  (Link to NCBI )
Study Title Rock surface microbial communities from Manoa Valley, Hawaii, United States - 20181204_8 metagenome
Study Abstract
  
SRA Study Id SRP259815  (Link to NCBI )
Study Title Rock surface microbial communities from Grand Staircase Escalante National Monument, Utah, United States - 20181204_57 metagenome
Study Abstract
  
SRA Study Id SRP259812  (Link to NCBI )
Study Title Soil microbial communities from Atacama Desert, Chile - 20181204_43 metagenome
Study Abstract
  
SRA Study Id SRP274217  (Link to NCBI )
Study Title Desert soil microbial communities from Utah, United States - 20190125_19 metagenome
Study Abstract
  
SRA Study Id SRP274218  (Link to NCBI )
Study Title Soil crust microbial communities from Mojave Desert, Joshua Tree National Park, California, United States - 20190126_21 metagenome
Study Abstract
  
SRA Study Id SRP284462  (Link to NCBI )
Study Title Cave wall surface microbial communities from Maniniholo Cave near Haena, Hawaii, United States - 20190131_40 metagenome
Study Abstract
  
SRA Study Id SRP284467  (Link to NCBI )
Study Title Damp rock surface microbial communities from Makauwahi Cave, Hawaii, United States - 20190225_14 metagenome
Study Abstract
  
SRA Study Id SRP284468  (Link to NCBI )
Study Title Soil crust microbial communities from Clark Mountains Wilderness, California, United States - 20190130_11 metagenome
Study Abstract
  
SRA Study Id SRP274201  (Link to NCBI )
Study Title Soil crust microbial communities from Clark Mountains Wilderness, California, United States - 20190225_6 metagenome
Study Abstract
  
SRA Study Id SRP274203  (Link to NCBI )
Study Title Soil microbial communities from Manoa Valley, Honolulu, Hawaii, United States - 20190130_7 metagenome
Study Abstract
  
SRA Study Id SRP274242  (Link to NCBI )
Study Title Freshwater microbial communities from Laie Falls, Oahu, Hawaii, United States - 20190130_49 metagenome
Study Abstract
  
SRA Study Id SRP259821  (Link to NCBI )
Study Title Soil microbial communities from Atacama Desert, Chile - 20181212_24i metagenome
Study Abstract
  
SRA Study Id SRP259788  (Link to NCBI )
Study Title Rock surface microbial communities from Stansstaad, Zurih, Switzerland - 20181029_55A metagenome
Study Abstract
  
SRA Study Id SRP259786  (Link to NCBI )
Study Title Soil microbial communities from Pinto Basin, Colorado Desert, California, United States - 20181029_32A metagenome
Study Abstract
  
SRA Study Id SRP259787  (Link to NCBI )
Study Title Cave wall surface microbial communities from Maniniholo Cave, Kauai, Hawaii, United States - 20181024_15A metagenome
Study Abstract
  
SRA Study Id SRP274248  (Link to NCBI )
Study Title Soil crust microbial communities from Mojave Desert, Joshua Tree National Park, California, United States - 20190201_50 metagenome
Study Abstract
  
SRA Study Id SRP274205  (Link to NCBI )
Study Title Soil microbial communities from Red Pass Lake area, Fort Irwin, California, United States - 20190112_9 metagenome
Study Abstract
  
SRA Study Id SRP290116  (Link to NCBI )
Study Title Cave wall surface microbial communities from Waikapalae Cave, Hawaii, United States - 20190625_16 metagenome
Study Abstract
  
SRA Study Id SRP290117  (Link to NCBI )
Study Title Desert soil microbial communities from Cadiz Valley, Joshua Tree National Park, CA, United States - 20190625_29 metagenome
Study Abstract
  
SRA Study Id SRP290115  (Link to NCBI )
Study Title Soil crust microbial communities from Clark Mountains Wilderness, California, United States - 20190625_12A metagenome
Study Abstract
  
SRA Study Id SRP259784  (Link to NCBI )
Study Title Soil microbial communities from Ahupua'a O Kahana State Park, Hawaii, United States - 20181012_27A metagenome
Study Abstract
  
SRA Study Id SRP284474  (Link to NCBI )
Study Title Mud microbial communities from Palolo Valley Trail, Honolulu, Hawaii, United States - 20190126_51 metagenome
Study Abstract
  
Legacy ER Study ID
Legacy GOLD ID
Added By JGI automated process on 2019-02-07
Last Modified By Tatiparthi Reddy on 2021-01-14
PI Nicole Pietrasiak
Description The goal of this study is to examine phylogenomic relationships and photosynthetic pigment evolution in terrestrial cyanobacteria
Relevance
Study Information Link
Study Information Visibility Public
Metagenomic Study Yes
Publication
Is GEBA
Is HMP
ECOSYSTEM CLASSIFICATION
Ecosystem Environmental
Ecosystem Category Terrestrial
Ecosystem Type Soil
Ecosystem Subtype Unclassified
Specific Ecosystem Unclassified
STUDY COMPOSITION
Number of Biosamples 64
Number of Organisms 0
Number of Seq Projects 64
Number of Analysis Projects 74
Number of Related Studies 0

 

 

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