SRA STUDY
SRA Study Id SRP107814  (Link to NCBI )
Study Title Spirulina Raw sequence reads
SRA Experiments
SRA Experiment Id SRX2843428  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared, filtered with 0.45 uM membrane, and ultra-centrifuged at 200,000 g - Clontech method with DNase treatment and with fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC18-ER200KRNA-045rq1frag-clontech-more
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843429  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared, filtered with 0.45 uM membrane, and ultra-centrifuged at 200,000 g - Clontech method with DNase treatment and with fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC18-ER200KRNA-045rq1frag-clontech
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843404  (Link to NCBI )
Experiment Title RNA sequencing of cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - MDA method
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection MDA
Library Name M73-ER4KRNA
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843426  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g - Clontech method with DNase treatment and with fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC20-ER200KRNA-rq1frag-clontech-more
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843427  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g - Clontech method with DNase treatment and with fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC20-ER200KRNA-rq1frag-clontech
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843424  (Link to NCBI )
Experiment Title DNA sequencing of extracellular pellet from Salton Sea sample pre-cleared and ultra-centrifuged at 200,000 g and pre-treatment of pellet with DNase
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name SS200KDNArq1-15min
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843469  (Link to NCBI )
Experiment Title CRISPR spacer amplification from cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - III-B arrays, primer pair 19
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name R51-PCR19-ER4KDNAenv
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843425  (Link to NCBI )
Experiment Title DNA sequencing of extracellular pellet from Salton Sea sample pre-cleared and ultra-centrifuged at 200,000 g
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name SS200KDNA-15min
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843367  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g - Clontech method with fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC19-ER200KRNA-frag-clontech
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843389  (Link to NCBI )
Experiment Title DNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name ER200KDNA
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843368  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g - Clontech method with fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC19-ER200KRNA-frag-clontech-more
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843387  (Link to NCBI )
Experiment Title DNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g and pre-treated with DNase
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name ER200KDNArq1
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843365  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared, filtered with 0.45 uM membrane, and ultra-centrifuged at 200,000 g - Clontech method with DNase treatment and without fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC21-ER200KRNA-045rq1-clontech
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843366  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared, filtered with 0.45 uM membrane, and ultra-centrifuged at 200,000 g - Clontech method with DNase treatment and without fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC21-ER200KRNA-045rq1-clontech-more
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843388  (Link to NCBI )
Experiment Title DNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g and pre-treated with DNase
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name ER200KDNArq1-R72
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843363  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g - Clontech method with DNase treatment and without fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC23-ER200KRNA-rq1-clontech
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843364  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g - Clontech method with DNase treatment and without fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC23-ER200KRNA-rq1-clontech-more
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843361  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g - Clontech method without fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC22-ER200KRNA-clontech
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843362  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g - Clontech method without fragmentation step
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name AC22-ER200KRNA-clontech-more
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843360  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared, filtered with 0.45 uM membrane, and ultra-centrifuged at 200,000 g - MDA method
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection MDA
Library Name M75-ER200KRNA045
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843359  (Link to NCBI )
Experiment Title RNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g - MDA method
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection MDA
Library Name M81-ER200KRNA
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843477  (Link to NCBI )
Experiment Title CRISPR spacer amplification from cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - III-B arrays, primer pair 20
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name R53-PCR20-ER4KDNAenv
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843433  (Link to NCBI )
Experiment Title RNA sequencing of cellular pellet from Salton Sea sample centrifuged at 4,000 g - MDA method
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection MDA
Library Name M74-SS4KRNA-repeat
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843478  (Link to NCBI )
Experiment Title CRISPR spacer amplification from cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - III-B arrays, primer pair 20
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name R54-PCR20-ER4KDNAenv
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843431  (Link to NCBI )
Experiment Title DNA sequencing of cellular pellet from Salton Sea sample centrifuged at 4,000 g
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name SS4KDNA-repeat
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843399  (Link to NCBI )
Experiment Title RNA sequencing of cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - Clontech SMARTer Stranded method
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name ER4KRNA-S29nimit
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843432  (Link to NCBI )
Experiment Title RNA sequencing of cellular pellet from Salton Sea sample centrifuged at 4,000 g - MDA method
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection MDA
Library Name M74-SS4KRNA
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843396  (Link to NCBI )
Experiment Title DNA sequencing of cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name ER4KDNA-R70
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843473  (Link to NCBI )
Experiment Title CRISPR spacer amplification from cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - III-D arrays, primer pair 4
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name R47-PCR4-ER4KDNAenv
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843430  (Link to NCBI )
Experiment Title DNA sequencing of cellular pellet from Salton Sea sample centrifuged at 4,000 g
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name SS4KDNA
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843375  (Link to NCBI )
Experiment Title RNA sequencing of cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - MDA method
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection MDA
Library Name M73-ER4KRNA-repeat
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843474  (Link to NCBI )
Experiment Title CRISPR spacer amplification from cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - III-D arrays, primer pair 4
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name R48-PCR4-ER4KDNAenv
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843471  (Link to NCBI )
Experiment Title CRISPR spacer amplification from cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - III-D arrays, primer pair 8
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name R49-PCR8-ER4KDNAenv
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843395  (Link to NCBI )
Experiment Title DNA sequencing of cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name ER4KDNA
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843472  (Link to NCBI )
Experiment Title CRISPR spacer amplification from cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - III-D arrays, primer pair 8
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name R50-PCR8-ER4KDNAenv
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843392  (Link to NCBI )
Experiment Title RNA sequencing of cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - circLigase method
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name ER4KRNA-R85josh
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843470  (Link to NCBI )
Experiment Title CRISPR spacer amplification from cellular pellet from Spirulina raceway pond sample centrifuged at 4,000 g - III-B arrays, primer pair 19
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name R52-PCR19-ER4KDNAenv
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
   
SRA Experiment Id SRX2843390  (Link to NCBI )
Experiment Title DNA sequencing of extracellular pellet from Spirulina raceway pond sample pre-cleared and ultra-centrifuged at 200,000 g
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name ER200KDNA-R71
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
Study Abstract
Alias PRJNA386819
External Id BioProject=PRJNA386819