|
SRA STUDY
|
|
SRA Study Id
|
SRP001137
(Link to NCBI )
|
|
Study Title
|
Multi-isolate study of Mycobacterium tuberculosis
|
|
SRA Experiments
|
| SRA Experiment Id |
SRX008788
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA library 'Solexa-62.1' containing sample XDR KZN 605 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-62.1 |
| Library Layout |
SINGLE |
| Library Instrument |
ILLUMINA_GENOME_ANALYZER_II |
| Spot Length |
36 |
| |
|
| SRA Experiment Id |
SRX008789
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA library 'Solexa-62.1' containing sample XDR KZN 605 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-62.1 |
| Library Layout |
SINGLE |
| Library Instrument |
ILLUMINA_GENOME_ANALYZER_II |
| Spot Length |
36 |
| |
|
| SRA Experiment Id |
SRX282112
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-63274' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-63274 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
202 |
| |
|
| SRA Experiment Id |
SRX282111
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-36233' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-36233 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
186 |
| |
|
| SRA Experiment Id |
SRX282110
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-52448' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Pond-52448 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
202 |
| |
|
| SRA Experiment Id |
SRX008782
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA library 'Solexa-62.1' containing sample XDR KZN 605 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-62.1 |
| Library Layout |
SINGLE |
| Library Instrument |
ILLUMINA_GENOME_ANALYZER_II |
| Spot Length |
36 |
| |
|
| SRA Experiment Id |
SRX282105
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA library 'Solexa-62.1' containing sample XDR KZN 605 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-62.1 |
| Library Layout |
SINGLE |
| Library Instrument |
ILLUMINA_GENOME_ANALYZER_II |
| Spot Length |
36 |
| |
|
| SRA Experiment Id |
SRX282109
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-62922' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-62922 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
202 |
| |
|
| SRA Experiment Id |
SRX282108
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-44946' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-44946 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
186 |
| |
|
| SRA Experiment Id |
SRX282107
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-36233' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-36233 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
202 |
| |
|
| SRA Experiment Id |
SRX282106
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-36233' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-36233 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_GENOME_ANALYZER_II |
| Spot Length |
186 |
| |
|
| SRA Experiment Id |
SRX110626
(Link to NCBI ) |
| Experiment Title |
Whole Genome Sequencing and Assembly |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
LR_61_Mtuberculosis |
| Library Layout |
SINGLE |
| Library Instrument |
PAC_BIO_RS |
| |
|
| SRA Experiment Id |
SRX110625
(Link to NCBI ) |
| Experiment Title |
Whole Genome Sequencing and Assembly |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
LR_61_Mtuberculosis |
| Library Layout |
SINGLE |
| Library Instrument |
PAC_BIO_RS |
| |
|
| SRA Experiment Id |
SRX110624
(Link to NCBI ) |
| Experiment Title |
Whole Genome Sequencing and Assembly |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
LR_57_Mtuberculosis |
| Library Layout |
SINGLE |
| Library Instrument |
PAC_BIO_RS |
| |
|
| SRA Experiment Id |
SRX005566
(Link to NCBI ) |
| Experiment Title |
Mycobacterium tuberculosis F11 Assembly |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
454-2428 |
| Library Layout |
SINGLE |
| Library Instrument |
454 GS FLX Titanium |
| |
|
| SRA Experiment Id |
SRX008656
(Link to NCBI ) |
| Experiment Title |
Mycobacterium tuberculosis F11 Assembly |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
454-2428 |
| Library Layout |
SINGLE |
| Library Instrument |
454 GS FLX Titanium |
| |
|
| SRA Experiment Id |
SRX008657
(Link to NCBI ) |
| Experiment Title |
Mycobacterium tuberculosis F11 Assembly |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
454-2428 |
| Library Layout |
SINGLE |
| Library Instrument |
454 GS FLX Titanium |
| |
|
| SRA Experiment Id |
SRX005560
(Link to NCBI ) |
| Experiment Title |
Mycobacterium tuberculosis F11 Assembly |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
454-2428 |
| Library Layout |
SINGLE |
| Library Instrument |
454 GS FLX Titanium |
| |
|
| SRA Experiment Id |
SRX282120
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-52448' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Pond-52448 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
88 |
| |
|
| SRA Experiment Id |
SRX282116
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-52448' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Pond-52448 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
202 |
| |
|
| SRA Experiment Id |
SRX282115
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-42856' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-42856 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
186 |
| |
|
| SRA Experiment Id |
SRX282114
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-60835' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-60835 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
202 |
| |
|
| SRA Experiment Id |
SRX282113
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-42856' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-42856 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
202 |
| |
|
| SRA Experiment Id |
SRX008790
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA library 'Solexa-62.1' containing sample XDR KZN 605 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-62.1 |
| Library Layout |
SINGLE |
| Library Instrument |
ILLUMINA_GENOME_ANALYZER_II |
| Spot Length |
36 |
| |
|
| SRA Experiment Id |
SRX282119
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-36233' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-36233 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
186 |
| |
|
| SRA Experiment Id |
SRX282118
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-42856' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-42856 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
202 |
| |
|
| SRA Experiment Id |
SRX422911
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA library 'Pond-52448' containing sample 'KZN 1435' |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Pond-52448 |
| Library Layout |
SINGLE |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
101 |
| |
|
| SRA Experiment Id |
SRX282117
(Link to NCBI ) |
| Experiment Title |
Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Solexa-36233' containing sample KZN 1435 |
| Exp Library Strategy |
WGS |
| Library Source |
GENOMIC |
| Library Selection |
RANDOM |
| Library Name |
Solexa-36233 |
| Library Layout |
PAIRED |
| Library Instrument |
ILLUMINA_HI_SEQ_2000 |
| Spot Length |
202 |
|
|
Study Abstract
|
|
|
Alias
|
Mycobacterium_tuberculosis_WGS_Comparative_multi_isolate
|
|
External Id
|
PRJNA52007
|
