SRA EXPERIMENT
SRA Experiment Id ERX3815207  (Link to NCBI )
Experiment Title MinION sequencing; Raw reads: A_deanei_assembly_nanopore
SRA Study
SRA Study Id ERP119328  (Link to NCBI )
Study Title Chromosomal assembly and annotation of Angomonas deanei nuclear genome
Study Abstract Angomonas deanei is an endosymbiont-bearing trypanosomatid with several highly fragmented genome assemblies and unknown chromosome number. We present an assembly of the Angomonas deanei nuclear genome based on Oxford Nanopore sequence that resolves into 29 complete or close-to-complete chromosomes. The assembly has several previously unknown special features; one chromosome is supernumerary, another has a 338 kilobase inversion, and there is a translocation between two chromosomes. We also present an updated annotation of the chromosomal genome with 10,365 protein-coding genes, 59 transfer RNAs, 26 ribosomal RNAs and 62 non-coding RNAs.
Alias ena-STUDY-York-13-01-2020-14:03:52:917-1877
External Id PRJEB36170
SRA Sample
SRA Sample Id ERS4235756  (Link to NCBI )
SRA Run
SRA Run Id ERR3813852  (Link to NCBI )
Spots 2051753
Bases 13302088880
Size 11904478694
Published Date 2020-08-08
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name
Library Layout SINGLE
Library Instrument MIN_ION
Exp. Description
Spot Length