PROJECT INFORMATION
GOLD Project ID
Gp0354174  
Project Name
Mediterranean forest soil microbial communities from Voltri Massif, Liguria, Italy - LIG_BR2_back_A1_2012  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID 265986
NCBI BioProject Accession PRJNA265986
NCBI Locus Tag
  
NCBI BioSample Accession SAMN03761831
PI Jerome P. Payet
Added By Jerome P. Payet on 2018-12-06
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center The Marine Biological Laboratory
Collaborating Institute
  
Funding Agency
  
Project Description
  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX1055338
Experiment Title 16s Illumina tag sequencing with technical replicates: Sample LIG_BR2_back_Jun12
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name LIG_BR2_back2_Jun12_Av4v5
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX1055082
Experiment Title Illumina shotgun metagenomic sequencing: Sample LIG_BR2_back_A1_2012
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name LIG_BR2_back_A1
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_1000
 
SRA Experiment Id SRX1055342
Experiment Title 16s Illumina tag sequencing with technical replicates: Sample LIG_BR2_back_Jun12
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name LIG_BR2_back1_Jun12_Bv4v5
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX1055343
Experiment Title 16s Illumina tag sequencing with technical replicates: Sample LIG_BR2_back_Jun12
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name LIG_BR2_back2_Jun12_Bv4v5
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
 
SRA Experiment Id SRX1055337
Experiment Title 16s Illumina tag sequencing with technical replicates: Sample LIG_BR2_back_Jun12
Exp Library Strategy AMPLICON
Library Source METAGENOMIC
Library Selection PCR
Library Name LIG_BR2_back1_Jun12_Av4v5
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Serpentinized rock microbial communities from various locations
Biosample Mediterranean forest soil microbial communities from Voltri Massif, Liguria, Italy - LIG_BR2_back_A1_2012
Analysis Projects Mediterranean forest soil microbial communities from Voltri Massif, Liguria, Italy - LIG_BR2_back_A1_2012
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) ILLUMINA_HI_SEQ_1000
Illumina HiSeq 1000
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Mediterranean forest soil microbial communities from Voltri Massif, Liguria, Italy - LIG_BR2_back_A1_2012
Other Names (alias, synonyms, short names)
  
Sample Description
Mediterranean forest soil microbial communities from Voltri Massif, Liguria, Italy  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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