PROJECT INFORMATION
GOLD Project ID
Gp0208022  
Project Name
Blakeslea trispora F921 Standard Draft  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Blakeslea trispora F921 Standard Draft
NCBI BioProject Accession PRJNA460324
NCBI Locus Tag
DFH14  
NCBI BioSample Accession SAMN09070611
PI Joseph Spatafora
Added By JGI automated process on 2017-03-07
Last Modified By JGI automated process on 2022-03-16
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Genome sequencing of a fungus from the early diverging lineage of fungi  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
Unrestricted  
JGI Award DOI 10.46936/10.25585/60001062
JGI Portal Download Raw Sequence Data
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id SRX4632617  (Link to NCBI )
Experiment Title Blakeslea trispora F921 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BHWHP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX4632618  (Link to NCBI )
Experiment Title Blakeslea trispora F921 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BHWHP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX4632615  (Link to NCBI )
Experiment Title Blakeslea trispora F921 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BHWHP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX4632616  (Link to NCBI )
Experiment Title Blakeslea trispora F921 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BHWHP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX4632619  (Link to NCBI )
Experiment Title Blakeslea trispora F921 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BHWHP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX4632620  (Link to NCBI )
Experiment Title Blakeslea trispora F921 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BHWHP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX4632621  (Link to NCBI )
Experiment Title Blakeslea trispora F921 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BHWHP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
 
SRA Experiment Id SRX4632622  (Link to NCBI )
Experiment Title Blakeslea trispora F921 Standard Draft
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection other
Library Name BHWHP
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
PROJECT COMPOSITION
Study Expanding fungal reference genomes with early diverging lineages (EDL) of fungi
Organism Blakeslea trispora F921
Analysis Projects Blakeslea trispora F921 Standard Draft
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio RS II
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
50  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0367721
Organism Name
Blakeslea trispora F921  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-MUCOROMYCOTA  
Genus
Blakeslea  
Genus Synonyms
  
Species
Blakeslea trispora  
Subspecies
  
Species Synonyms
  
Strain
F921  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 4850
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Mucoromycota  
NCBI Class
Mucoromycetes  
NCBI Order
Mucorales  
NCBI Family
Choanephoraceae  
NCBI Genus
Blakeslea  
NCBI Species
Blakeslea trispora  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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