PROJECT NAME
GOLD Project ID
Gp0198191  
Project Name
Rhizoctonia solani AG-1 IA strain:1802/KB Genome sequencing  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Rhizoctonia solani AG-1 IA strain:1802/KB
NCBI BioProject ID 354902
NCBI BioProject Accession
PRJNA354902  
NCBI Locus Tag
  
NCBI BioSample Accession
SAMN06054123  
PI Boon Huat Cheah
Added By Boon Huat Cheah on 2017-02-14
Last Modified By JGI automated process on 2017-02-20
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Beijing Genomics Institute (BGI) (China)
Collaborating Institute Bionivid Technology Pvt Ltd
Funding Agency
  
Project Description
Shealth blight caused by R. solani AG1 subgroup IA is the second most devastating disease of rice after rice blast. Here we report the draft genome sequence of a Malaysian R. solani AG1-IA strain 1802/KB, which was isolated from the diseased rice tissues from paddy fields in Malaysia. The availability of this draft genome sequence serves as the foundation for future transcriptomic, proteomic and comparative genomics analyses to understand the mode of infection and evolution of this phytopathogen. The acquired knowledge of these studies could improve the control of sheath blight disease in rice-growing areas worldwide.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
PROJECT COMPOSITION
Studies Draft Genome Sequence of Rhizoctonia solani AG1-IA strain 1802/KB Isolated from Rice
Analysis Projects Rhizoctonia solani AG-1 IA strain:1802/KB Genome sequencing
SEQUENCING INFORMATION
Sequencing Status Draft
Sequencing Quality (MIGS-31) Level 2: High-Quality Draft
Finishing Goal Level 2: High-Quality Draft
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
2 X 300 bp paired-end  
Number Of Reads
28,648,942  
Read Size
100 bp  
Vector
  
GC Percent
47  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0094222
Organism Name
Rhizoctonia solani AG-1 IA  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
FUNGI-BASIDIOMYCOTA  
Genus
Rhizoctonia  
Genus Synonyms
  
Species
Rhizoctonia solani  
Subspecies
  
Species Synonyms
  
Strain
AG-1 IA  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 983506
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Fungi  
NCBI Phylum
Basidiomycota  
NCBI Class
Agaricomycetes  
NCBI Order
Cantharellales  
NCBI Family
Ceratobasidiaceae  
NCBI Genus
Rhizoctonia  
NCBI Species
Rhizoctonia solani  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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