PROJECT NAME
GOLD Project ID
Gp0000007  
Project Name
Erwinia pyrifoliae Ep1/96  
Other Names
  
Legacy ER Project ID
13127  
Legacy GOLD ID
Gi02550, Gc01170  
NCBI BioProject Name Erwinia pyrifoliae Ep1/96
NCBI BioProject ID 34779
NCBI BioProject Accession
PRJEA34779  
NCBI Locus Tag
EpC  
NCBI BioSample Accession
  
PI Kube M
Added By Nikos Kyrpides on 2007-12-03 00:00:00.0
Last Modified By Auto script update processes on 2014-05-20 00:00:00.0
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Comparative analysis
Pathogen
Sequencing Center Max Planck Institute (Germany)
Collaborating Institute
  
Funding Agency Max Planck Institute (Germany)
Project Description
This strain will be used for comparative genome analysis  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Isolation
Database
  
Genome Publications BMC genomics 11(393):393 Genome comparison of the epiphytic bacteria Erwinia billingiae and E. tasmaniensis with the pear pathogen E. pyrifoliae.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Erwinia pyrifoliae Ep1/96
Analysis Projects Erwinia pyrifoliae Ep1/96
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454-GS20
Sanger
Library Method (MIGS-28)
1.5 kb, 2.5 kb, 37 kb   
Number Of Reads
24252 (Sanger), 1043447 (454-GS20)  
Read Size
  
Vector
  
GC Percent
53  
Chromosome Count
1  
Plasmid Count
4  
ORGANISM NAME
GOLD Organism ID Go0000007
Organism Name
Erwinia pyrifoliae Ep1/96  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-GAMMA  
Genus
Erwinia  
Genus Synonyms
  
Species
Erwinia pyrifoliae  
Subspecies
  
Species Synonyms
  
Strain
Ep1/96  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
DSM 12162  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.3190  
Exemplar Name
Erwinia pyrifoliae  
Taxon DOI
10.1601/tx.3190  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 634499
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Gammaproteobacteria  
NCBI Order
Enterobacteriales  
NCBI Family
Enterobacteriaceae  
NCBI Genus
Erwinia  
NCBI Species
Erwinia pyrifoliae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 163046
Genbank 16S ID AJ009930:{1-1529}
Synonym List
GENERAL PROPERTIES
Oxygen Requirement
Facultative  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes Pathogen
Energy Sources
  

 

 

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