PROJECT NAME
GOLD Project ID
Gp0000003  
Project Name
Methanosphaerula palustris E1-9c, DSM 19958  
Other Names
  
Legacy ER Project ID
13131  
Legacy GOLD ID
Gi02554, Gc01080  
NCBI BioProject Name Methanosphaerula palustris E1-9c
NCBI BioProject ID 29381
NCBI BioProject Accession
PRJNA29381  
NCBI Locus Tag
Mpal  
NCBI BioSample Accession
SAMN00001866  
PI Stephen Zinder
Added By Nikos Kyrpides on 2007-12-03
Last Modified By Michelle Isbandi on 2016-05-05
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Comparative analysis
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Wetlands methanogenic bacterium  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information Isolation
Database
  
Genome Publications Genome announcements Complete Genome Sequence of Methanosphaerula palustris E1-9CT, a Hydrogenotrophic Methanogen Isolated from a Minerotrophic Fen Peatland.
Other Publications
  
PROJECT COMPOSITION
Studies Candidatus Methanosphaerula palustris E1-9c
Analysis Projects Methanosphaerula palustris E1-9c, DSM 19958
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) 454
Sanger
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
55  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000003
Organism Name
Methanosphaerula palustris E1-9c, DSM 19958  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-METHANOMICROBIA  
Genus
Methanosphaerula  
Genus Synonyms
  
Species
Methanosphaerula palustris  
Subspecies
  
Species Synonyms
  
Strain
E1-9c, DSM 19958  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
ATCC BAA-1556  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.14243  
Exemplar Name
Methanosphaerula palustris  
Taxon DOI
10.1601/tx.14243  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 521011
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Methanomicrobia  
NCBI Order
Methanomicrobiales  
NCBI Family
Methanoregulaceae  
NCBI Genus
Methanosphaerula  
NCBI Species
Methanosphaerula palustris  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Wetlands  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 842149
Genbank 16S ID EU156000:{1-1465}
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Anaerobe  
Cell Shape
Coccus-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
30  
Salinity
  
pH
5.5  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram+  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Pairs
Diseases None
Known Habitats Soil
Metabolisms Methanogen
Phenotypes
  
Energy Sources
  

 

 

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