PROJECT NAME
GOLD Project ID
Gp0000023  
Project Name
Sorangium cellulosum So ce 56  
Other Names
  
Legacy ER Project ID
10009  
Legacy GOLD ID
Gi00561, Gc00676  
NCBI BioProject Name Sorangium cellulosum 'So ce 56'
NCBI BioProject ID 28111
NCBI BioProject Accession
PRJNA28111  
NCBI Locus Tag
sce  
NCBI BioSample Accession
SAMEA3138271  
PI Muller R
Added By Nikos Kyrpides on 2007-11-27
Last Modified By Auto script update processes on 2014-03-26
Project Comments
  
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
PROJECT INFORMATION
Project Status
Complete and Published  
Project Relevance Biotechnological
Sequencing Center
  
Collaborating Institute Bielefeld University (Germany)
Funding Agency Federal Ministry of Education and Research (BMBF) (Germany)
Project Description
Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. The genome of this organism will provide information on the production of these and other potentially useful secondary metabolites.  
Project Information Visibility
Public  
EXTERNAL PROJECT LINKS
Project Information Entrez
Taxonomy
Database
  
Genome Publications Nature biotechnology Complete genome sequence of the myxobacterium Sorangium cellulosum.
Other Publications
  
Isolation Publications
  
NCBI SRA ID
  
PROJECT COMPOSITION
Studies Sorangium cellulosum So ce 56
Analysis Projects Sorangium cellulosum So ce 56
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
  
Sequencing Technology (MIGS-29) Sanger
Library Method (MIGS-28)
1-8 kb  
Number Of Reads
207009  
Read Size
  
Vector
pTZ18R, pUC18, pTOPO, pUC19  
GC Percent
71  
Chromosome Count
1  
Plasmid Count
0  
ORGANISM NAME
GOLD Organism ID Go0000023
Organism Name
Sorangium cellulosum So ce 56  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-DELTA  
Genus
Sorangium  
Genus Synonyms
  
Species
Sorangium cellulosum  
Subspecies
  
Species Synonyms
  
Strain
So ce 56  
Strain Synonyms
  
Serovar-Biovar
  
Culture Collection ID
  
Type Strain
Unknown  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 448385
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Deltaproteobacteria  
NCBI Order
Myxococcales  
NCBI Family
Polyangiaceae  
NCBI Genus
Sorangium  
NCBI Species
Sorangium cellulosum  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
Synonym List
  
GENERAL PROPERTIES
Oxygen Requirement
Aerobe  
Cell Shape
Rod-shaped  
Motility
Motile  
Sporulation
  
Temperature Range
Mesophile  
Temperature Optimum
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
Gram-  
Biotic Relationships
ID 3
Term Free living
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Clusters
Singles
Diseases None
Known Habitats Soil
Terrestrial
Metabolisms Cellulose degrader
Phenotypes
  
Energy Sources
  

 

 

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