JGI GOLD | Project

PROJECT INFORMATION
GOLD Project ID	Gp0652552
Project Name	Desulfovibrio desulfuricans DFI.2.30
Other Names
Legacy GOLD ID
NCBI BioProject Name	Duchossois Family Institute Symbiotic Strain Bank
NCBI BioProject Accession	PRJNA737800
NCBI Locus Tag	LIZ33
NCBI BioSample Accession	SAMN22167590
Source Sample ID
PI	Unknown
Added By	JGI automated process on 2022-06-29
Last Modified By
Project Comments
Project Status	Permanent Draft
Project Relevance	Medical
Sequencing Center	University of Chicago (USA)
Collaborating Institute
Funding Agency
Project Description	Desulfovibrio desulfuricans DFI.2.30 genome sequencing from a collection of gut derived symbiotic bacterial strains cultured from healthy donors
Is JGI Project	No
Project Information Visibility	Public
PROJECT TYPE
Specimen	Organism
Nucleic Acid	DNA
Sequencing Strategy	Whole Genome Sequencing
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
JGI Award DOI
Genome Publications
Other Publications
Ignored Publications
Unassigned Publications
SRA Experiment
PROJECT COMPOSITION
Study	A collection of gut derived symbiotic bacterial strains cultured from healthy donors
Organism	Desulfovibrio desulfuricans DFI.2.30
Analysis Projects	Desulfovibrio desulfuricans DFI.2.30
Number of Analysis Projects (AP)	1
Number of Derived Analyis Projects (DAP)	0

SEQUENCING INFORMATION
Sequencing Status	Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
DNA Amplification Method
Single Cell Lysis Protocol
Single Cell Lysis Approach
Sequencing Comments
DNA Amplification Kit
Sequencing Technology (MIGS-29)
Library Method (MIGS-28)
Library Layout
Library Screening Method
Number Of Reads
Read Size
Vector
GC Percent
Chromosome Count
Plasmid Count

ORGANISM NAME
GOLD Organism ID	Go0635185
Organism Name	Desulfovibrio desulfuricans DFI.2.30
Other names (alias, synonyms, short names, common names)
Organism Domain	BACTERIAL
Phylogeny	PROTEOBACTERIA-DELTA
Genus	Desulfovibrio
Genus Synonyms
Species	Desulfovibrio desulfuricans
Subspecies
Species Synonyms
Strain	DFI.2.30
Strain Synonyms
Serovar/Cultivar
Culture Collection ID
Type Strain
Exemplar DOI
Exemplar Name
Taxon DOI
Biosafety Level
Organism Comments
Cultured	Yes
Culture Type	Isolate
Organism Type	Natural
Uncultured Type
Commercial Strain
Commercial Strain Comments
ORGANISM TAXONOMY
NCBI Taxonomy ID	876
NCBI Superkingdom	Bacteria
NCBI Kingdom
NCBI Phylum	Thermodesulfobacteriota
NCBI Class	Desulfovibrionia
NCBI Order	Desulfovibrionales
NCBI Family	Desulfovibrionaceae
NCBI Genus	Desulfovibrio
NCBI Species	Desulfovibrio desulfuricans
ISOLATION CLASSIFICATION
Ecosystem	Host-associated
Ecosystem Category	Mammals: Human
Ecosystem Type	Digestive system
Ecosystem Subtype	Large intestine
Specific Ecosystem	Fecal
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID

GENERAL PROPERTIES
Oxygen Requirement
Cell Shape
Motility
Sporulation
Temperature Range
Salinity
pH
Cell Diameter
Cell Length
Color
Gram Staining
Biotic Relationships
Symbiotic Physical Interaction
Symbiotic Relationship
Symbiont Name
Symbiont Taxon ID
Cell Arrangements
Diseases
Known Habitats
Metabolisms
Phenotypes
Energy Sources

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