PROJECT INFORMATION
GOLD Project ID
Gp0643400  
Project Name
Tundra soil microbial communities from Alaska, United States - HI.B4  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name The North American Arctic Transect, NAAT and the Eurasian Arctic Transect, EAT
NCBI BioProject Accession PRJEB29570
NCBI Locus Tag
  
NCBI BioSample Accession SAMEA5072027
PI
Added By JGI automated process on 2022-05-02
Last Modified By Supratim Mukherjee on 2022-05-18
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center University of California, San Diego (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Tundra soil microbial communities from Alaska, United States  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id ERX2886838  (Link to NCBI )
Experiment Title Illumina MiSeq sequencing; qiita_ptid_5704:10246.HI.B4
Exp Library Strategy OTHER
Library Source METAGENOMIC
Library Selection PCR
Library Name 10246.HI.B4
Library Layout SINGLE
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Soil microbial communities from tundra in Russia and Canada
Biosample Tundra soil microbial communities from Alaska, United States - HI.B4
Analysis Projects Tundra soil microbial communities from Alaska, United States - HI.B4
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Tundra soil microbial communities from Alaska, United States - HI.B4
Other Names (alias, synonyms, short names)
  
Sample Description
Tundra soil microbial communities from Alaska, United States  
SAMPLE TAXONOMY
NCBI Taxonomy ID 410658
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Tundra  
Specific Ecosystem
Bulk soil  

 

 

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