PROJECT INFORMATION
GOLD Project ID
Gp0609142  
Project Name
Gossypium harknessii 0  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Thirteen genome sequences representing the entire subgenus Houzingenia
NCBI BioProject Accession PRJNA488266
NCBI Locus Tag
Gohar  
NCBI BioSample Accession SAMN10346753
PI
Added By JGI automated process on 2021-12-23
Last Modified By JGI automated process on 2021-12-27
Project Comments
  
Project Status
Complete and Published  
Project Relevance Evolution
Sequencing Center Mississippi State University (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Gossypium harknessii 0 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications Genome biology and evolution 11(1):53-71 Insights into the Evolution of the New World Diploid Cottons (Gossypium, Subgenus Houzingenia) Based on Genome Sequencing.

SRA Experiment
  
PROJECT COMPOSITION
Study Gossypium thurberi 35 genome sequencing
Organism Gossypium harknessii 0
Analysis Projects Gossypium harknessii 0
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0595197
Organism Name
Gossypium harknessii 0  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
EUKARYAL  
Phylogeny
PLANTS-STREPTOPHYTA  
Genus
Gossypium  
Genus Synonyms
  
Species
Gossypium harknessii  
Subspecies
  
Species Synonyms
  
Strain
  
Strain Synonyms
  
Serovar/Cultivar
0  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 34285
NCBI Superkingdom
Eukaryota  
NCBI Kingdom
Viridiplantae  
NCBI Phylum
Streptophyta  
NCBI Class
Magnoliopsida  
NCBI Order
Malvales  
NCBI Family
Malvaceae  
NCBI Genus
Gossypium  
NCBI Species
Gossypium harknessii  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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