PROJECT INFORMATION | |
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GOLD Project ID
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Gp0595111
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Project Name
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Thermal water microbial communities from acid lake in the Chichonal volcano crater, Chiapas, Mexico - WC1
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Other Names
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Legacy GOLD ID
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NCBI BioProject Name |
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NCBI BioProject Accession
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NCBI Locus Tag
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NCBI BioSample Accession
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PI | Roberto Marin |
Added By |
Roberto Marin
on 2021-11-05 |
Last Modified By |
Roberto Marin
on 2021-11-15 |
Project Comments |
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Project Status
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incomplete
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Project Relevance
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Sequencing Center
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National Autonomous University of Mexico
(Mexico)
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Collaborating Institute
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Funding Agency
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Project Description
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Is JGI Project |
No
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Project Information Visibility
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Public |
PROJECT TYPE | |
Specimen
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Biome |
Nucleic Acid
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DNA |
Sequencing Strategy
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Metagenome
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EXTERNAL PROJECT LINKS | |
JGI Data Utilization Status
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JGI Award DOI
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Genome Publications
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Other Publications
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Ignored Publications
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Unassigned Publications
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SRA Experiment |
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PROJECT COMPOSITION | |
Study |
Thermal water microbial communities from acid lake in the Chichonal volcano crater, Chiapas, Mexico |
Biosample |
Thermal water from acid lake in the Chichonal volcano crater, Chiapas, Mexico - WCH1 |
Analysis Projects |
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Number of Analysis Projects (AP) |
0 |
Number of Derived Analyis Projects (DAP) |
0
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SEQUENCING INFORMATION | |
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Sequencing Status
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Complete |
Sequencing Quality (MIGS-31) |
Level 2: High-Quality Draft |
Finishing Goal
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Contamination Screening Input
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DNA Amplification Method
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Sorting Technology
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Single Cell Lysis Protocol
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Single Cell Lysis Approach
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Sequencing Comments
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DNA Amplification Kit
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Sequencing Technology
(MIGS-29)
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Illumina NextSeq 550 |
Library Method
(MIGS-28)
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Library Layout
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Library Screening Method
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Number Of Reads
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Read Size
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Vector
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GC Percent |
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Chromosome Count |
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Plasmid Count |
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SAMPLE NAME | |
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Sample Name |
Thermal water from acid lake in the Chichonal volcano crater, Chiapas, Mexico - WCH1 |
Other Names (alias, synonyms, short names) |
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Sample Description |
Thermal water from acid lake in a volcano crater
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SAMPLE TAXONOMY | |
NCBI Taxonomy ID |
433727 |
GOLD CLASSIFICATION | |
Ecosystem |
Environmental
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Ecosystem Category |
Aquatic
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Ecosystem Type |
Thermal springs
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Ecosystem Subtype |
Acid lake
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Specific Ecosystem |
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