PROJECT INFORMATION
GOLD Project ID
Gp0548464  
Project Name
Cytophagales bacterium WSM2-2  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Cytophagales bacterium strain:strain WSM2-2
NCBI BioProject Accession PRJDB10512
NCBI Locus Tag
  
NCBI BioSample Accession SAMD00244891
PI
Added By JGI automated process on 2021-03-12
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center National Institute of Technology, Wakayama College
Collaborating Institute
  
Funding Agency
  
Project Description
Cytophagales bacterium WSM2-2 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
Genome Publications
  
Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
 
SRA Experiment Id DRX238111  (Link to NCBI )
Experiment Title Illumina NovaSeq 6000 paired end sequencing of SAMD00244891
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name Illumina_150PE
Library Layout PAIRED
 
SRA Experiment Id DRX238110  (Link to NCBI )
Experiment Title MinION sequencing of SAMD00244891
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection unspecified
Library Name Nanopore_MinION
Library Layout SINGLE
Library Instrument MIN_ION
PROJECT COMPOSITION
Study Cytophagales bacterium WSM2-2
Organism Cytophagales bacterium WSM2-2
Analysis Projects Cytophagales bacterium WSM2-2
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina Novaseq 150 bp PE
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0573795
Organism Name
Cytophagales bacterium WSM2-2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
BACTEROIDETES  
Genus
  
Genus Synonyms
  
Species
Cytophagales bacterium WSM2-2  
Subspecies
  
Species Synonyms
  
Strain
WSM2-2  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2774202
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Bacteroidetes  
NCBI Class
Cytophagia  
NCBI Order
Cytophagales  
NCBI Family
  
NCBI Genus
  
NCBI Species
Cytophagales bacterium WSM2-2  
ISOLATION CLASSIFICATION
Ecosystem
  
Ecosystem Category
  
Ecosystem Type
  
Ecosystem Subtype
  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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