PROJECT INFORMATION
GOLD Project ID
Gp0514974  
Project Name
Wastewater microbial communities from Kampala, Uganda - WW1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name wastewater metagenome
NCBI BioProject ID 423296
NCBI BioProject Accession PRJNA423296
NCBI Locus Tag
  
NCBI BioSample Accession SAMN08275684
PI
Added By JGI automated process on 2020-11-25
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Swiss Tropical and Public Health Institute
Collaborating Institute
  
Funding Agency
  
Project Description
Wastewater microbial communities from Kampala, Uganda  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX3521437  (Link to NCBI )
Experiment Title Metagenome of Nakivubo system - Kampala
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection RANDOM
Library Name WW1
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Wastewater microbial communities from Kampala, Uganda
Biosample Wastewater microbial communities from Kampala, Uganda - WW1
Analysis Projects Wastewater microbial communities from Kampala, Uganda - WW1
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina HiSeq 2500
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Wastewater microbial communities from Kampala, Uganda - WW1
Other Names (alias, synonyms, short names)
  
Sample Description
Wastewater microbial communities from Kampala, Uganda  
SAMPLE TAXONOMY
NCBI Taxonomy ID 527639
GOLD CLASSIFICATION
Ecosystem
Engineered  
Ecosystem Category
Wastewater  
Ecosystem Type
Industrial wastewater  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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