PROJECT INFORMATION
GOLD Project ID
Gp0505461  
Project Name
Erysipelothrix inopinata DSM 15511  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Genome sequencing of Erysipelothrix inopinata DSM 15511
NCBI BioProject ID 658868
NCBI BioProject Accession PRJNA658868
NCBI Locus Tag
H9L01  
NCBI BioSample Accession SAMN15892348
PI Dong-Wook Hyun
Added By JGI automated process on 2020-09-11
Last Modified By JGI automated process on 2020-09-19
Project Comments
  
Project Status
Complete and Published  
Project Relevance Environmental
Sequencing Center Kyunghee University (South Korea)
Collaborating Institute
  
Funding Agency
  
Project Description
Genome sequencing of Erysipelothrix inopinata DSM 15511  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Genome sequencing of Erysipelothrix inopinata DSM 15511
Organism Erysipelothrix inopinata DSM 15511
Analysis Projects Erysipelothrix inopinata DSM 15511
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Contamination Screening Input
  
DNA Amplification Method
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio RSII
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0013432
Organism Name
Erysipelothrix inopinata DSM 15511  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
FIRMICUTES  
Genus
Erysipelothrix  
Genus Synonyms
  
Species
Erysipelothrix inopinata  
Subspecies
  
Species Synonyms
  
Strain
DSM 15511  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
DSM 15511  
Type Strain
Yes  
Exemplar DOI
10.1601/ex.4846  
Exemplar Name
Erysipelothrix inopinata  
Taxon DOI
10.1601/tx.4846  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1121873
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Firmicutes  
NCBI Class
Erysipelotrichia  
NCBI Order
Erysipelotrichales  
NCBI Family
Erysipelotrichaceae  
NCBI Genus
Erysipelothrix  
NCBI Species
Erysipelothrix inopinata  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Unclassified  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID 16481
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
Microaerophilic  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
Nonsporulating  
Temperature Range
Mesophile  
Salinity
  
pH
8  
Cell Diameter
0.5 um  
Cell Length
1.5-3.0 um  
Color
  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Plants
Vegetables
Metabolisms
  
Phenotypes Catalase negative
Energy Sources
  

 

 

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