PROJECT INFORMATION
GOLD Project ID
Gp0497418  
Project Name
Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Sequencing of a global collection of 1315 chickpea nodulating Mesorhizobium strains
NCBI BioProject ID 453501
NCBI BioProject Accession PRJNA453501
NCBI Locus Tag
EJ066  
NCBI BioSample Accession SAMN09232642
PI
Added By JGI automated process on 2020-07-06
Last Modified By JGI automated process on 2020-07-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Evolution
Sequencing Center University of California, Davis (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Sequencing as part of a global collection of 1315 chickpea nodulating Mesorhizobium strains  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX4288708  (Link to NCBI )
Experiment Title 2P3S1-b
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name M9A.F.Ca.ET.002.03.1.2
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_4000
 
SRA Experiment Id SRX4964549  (Link to NCBI )
Experiment Title 2P3S1-b
Exp Library Strategy WGS
Library Source GENOMIC
Library Selection RANDOM
Library Name M9A.F.Ca.ET.002.03.1.2
Library Layout SINGLE
Library Instrument PAC_BIO_RS_II
PROJECT COMPOSITION
Study Sequencing of a global collection of 1315 chickpea nodulating Mesorhizobium strains
Organism Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2
Analysis Projects Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RSII
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0546479
Organism Name
Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Mesorhizobium  
Genus Synonyms
  
Species
Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2  
Subspecies
  
Species Synonyms
  
Strain
M9A.F.Ca.ET.002.03.1.2  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2493668
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhizobiales  
NCBI Family
Phyllobacteriaceae  
NCBI Genus
Mesorhizobium  
NCBI Species
Mesorhizobium sp. M9A.F.Ca.ET.002.03.1.2  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Roots  
Ecosystem Subtype
Nodule  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Root nodule
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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