JGI GOLD | Project

PROJECT INFORMATION
GOLD Project ID	Gp0492618
Project Name	Agromyces mariniharenae NEAU-184
Other Names
Legacy GOLD ID
NCBI BioProject Name	Agromyces mariniharenae NEAU-184 genome sequencing
NCBI BioProject Accession	PRJNA561029
NCBI Locus Tag	FYC51
NCBI BioSample Accession	SAMN12605985
Source Sample ID
PI	Unknown
Added By	JGI automated process on 2020-07-02
Last Modified By	Van Handke on 2023-05-22
Project Comments
Project Status	Permanent Draft
Project Relevance
Sequencing Center	Northeast Agricultural University (China)
Collaborating Institute
Funding Agency
Project Description	Agromyces mariniharenae NEAU-184 genome sequencing
Is JGI Project	No
Project Information Visibility	Public
PROJECT TYPE
Specimen	Organism
Nucleic Acid	DNA
Sequencing Strategy	Whole Genome Sequencing
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
JGI Award DOI
Genome Publications	International journal of systematic and evolutionary microbiology: sp. nov., a novel indole-acetic acid producing actinobacterium isolated from marine sand. PubMed: 34559623 DOI: 10.1099/ijsem.0.005026
Other Publications
Ignored Publications
Unassigned Publications
SRA Experiment
PROJECT COMPOSITION
Study	Agromyces mariniharenae NEAU-184 genome sequencing
Organism	Agromyces mariniharenae NEAU-184
Analysis Projects	Agromyces mariniharenae NEAU-184
Number of Analysis Projects (AP)	1
Number of Derived Analyis Projects (DAP)	0

SEQUENCING INFORMATION
Sequencing Status	Complete
Sequencing Quality (MIGS-31)	Level 2: High-Quality Draft
Finishing Goal
Contamination Screening Input
DNA Amplification Method
Single Cell Lysis Protocol
Single Cell Lysis Approach
Sequencing Comments
DNA Amplification Kit
Sequencing Technology (MIGS-29)	Illumina HiSeq
Library Method (MIGS-28)
Library Layout
Library Screening Method
Number Of Reads
Read Size
Vector
GC Percent
Chromosome Count
Plasmid Count

ORGANISM NAME
GOLD Organism ID	Go0541768
Organism Name	Agromyces mariniharenae NEAU-184
Other names (alias, synonyms, short names, common names)
Organism Domain	BACTERIAL
Phylogeny	ACTINOMYCETOTA
Genus	Agromyces
Genus Synonyms
Species	Agromyces mariniharenae
Subspecies
Species Synonyms
Strain	NEAU-184
Strain Synonyms
Serovar/Cultivar
Culture Collection ID	CGMCC 4.7505
Type Strain	Yes
Exemplar DOI
Exemplar Name
Taxon DOI
Biosafety Level
Organism Comments
Cultured	Yes
Culture Type	Isolate
Organism Type	Natural
Uncultured Type
Commercial Strain
Commercial Strain Comments
ORGANISM TAXONOMY
NCBI Taxonomy ID	2604423
NCBI Superkingdom	Bacteria
NCBI Kingdom
NCBI Phylum	Actinomycetota
NCBI Class	Actinomycetes
NCBI Order	Micrococcales
NCBI Family	Microbacteriaceae
NCBI Genus	Agromyces
NCBI Species	Agromyces mariniharenae
ISOLATION CLASSIFICATION
Ecosystem	Environmental
Ecosystem Category	Terrestrial
Ecosystem Type	Soil
Ecosystem Subtype	Sand
Specific Ecosystem	Unclassified
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID

GENERAL PROPERTIES
Oxygen Requirement	Aerobe
Cell Shape	Rod-shaped
Motility
Sporulation	Nonsporulating
Temperature Range
Salinity
pH
Cell Diameter
Cell Length
Color
Gram Staining	Gram+
Biotic Relationships
Symbiotic Physical Interaction
Symbiotic Relationship
Symbiont Name
Symbiont Taxon ID
Cell Arrangements
Diseases
Known Habitats
Metabolisms
Phenotypes
Energy Sources	Heterotroph

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