PROJECT INFORMATION
GOLD Project ID
Gp0479582  
Project Name
Microcoleus vaginatus WJT46-NPBG5 and co-occurring heterotrophs from desert soil from Joshua Tree National Park, Colorado Desert, CA, United States - 20190301_28B  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Microcoleus vaginatus WJT46-NPBG5 and co-occurring heterotrophs from desert soil from Joshua Tree National Park, Colorado Desert, CA, United States - 20190301_28B
NCBI BioProject ID 711321
NCBI BioProject Accession PRJNA711321
NCBI Locus Tag
J3A85  
NCBI BioSample Accession SAMN18250794
PI Nicole Pietrasiak
Added By JGI automated process on 2020-02-14
Last Modified By JGI automated process on 2021-04-17
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Microcoleus vaginatus WJT46-NPBG5 and co-occurring heterotrophs from desert soil from Joshua Tree National Park, Colorado Desert, CA, United States - 20190301_28B  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Terrestrial cyanobacterial communities with co-occurring heterotrophs from various environments and locations
Biosample Microcoleus vaginatus WJT46-NPBG5 and co-occurring heterotrophs from desert soil from Joshua Tree National Park, Colorado Desert, CA, United States - 20190301_28B
Organism
Analysis Projects Microcoleus vaginatus WJT46-NPBG5 and co-occurring heterotrophs from desert soil from Joshua Tree National Park, Colorado Desert, CA, United States - 20190301_28B
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio Sequel II
Illumina NovaSeq S4
Library Method (MIGS-28)
Illumina Regular Fragment, 300bp, Tubes  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Microcoleus vaginatus WJT46-NPBG5 and co-occurring heterotrophs from desert soil from Joshua Tree National Park, Colorado Desert, CA, United States - 20190301_28B
Other Names (alias, synonyms, short names)
  
Sample Description
Microcoleus vaginatus WJT46-NPBG5 and co-occurring heterotrophs from desert soil from Joshua Tree National Park, Colorado Desert, CA, United States - 20190301_28B  
SAMPLE TAXONOMY
NCBI Taxonomy ID 1300146
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Soil  
Ecosystem Subtype
Sand  
Specific Ecosystem
Desert  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?