PROJECT INFORMATION
GOLD Project ID
Gp0467417  
Project Name
Metatranscriptome of water microbial communities from western Lake Erie, Ohio, USA - E2014-0086  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Lake water metagenome
NCBI BioProject ID 464361
NCBI BioProject Accession PRJNA464361
NCBI Locus Tag
  
NCBI BioSample Accession SAMN09102079
PI
Added By JGI automated process on 2020-01-08
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Environmental
Sequencing Center University of Michigan (USA)
Collaborating Institute
  
Funding Agency
  
Project Description
Metatranscriptome of water microbial communities from western Lake Erie, Ohio, USA  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid RNA
Sequencing Strategy
Metatranscriptome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX4099281  (Link to NCBI )
Experiment Title >100 _m particle-attached community metagenomes, WE4, Sept 8th 2014, raw reads
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name E2014-0086-100LTR-53191
Library Layout SINGLE
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Water microbial communities from western Lake Erie, Ohio, USA
Biosample Water microbial communities from western Lake Erie, Ohio, USA - E2014-0086
Analysis Projects Metatranscriptome of water microbial communities from western Lake Erie, Ohio, USA - E2014-0086
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) ILLUMINA_HI_SEQ_2500
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Water microbial communities from western Lake Erie, Ohio, USA - E2014-0086
Other Names (alias, synonyms, short names)
  
Sample Description
Water microbial communities from western Lake Erie, Ohio, USA  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Lake  
Specific Ecosystem
  

 

 

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