PROJECT INFORMATION
GOLD Project ID
Gp0467403  
Project Name
Metatranscriptome of fecal microbial communities from individual in Luxembourg Centre for Systems Biomedicine, Luxembourg - M04.5-V3-stool  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Human Gut Microbiome in a Multiplex Family Study of Type 1 Diabetes Mellitus
NCBI BioProject ID 289586
NCBI BioProject Accession PRJNA289586
NCBI Locus Tag
  
NCBI BioSample Accession SAMN04571733
PI
Added By JGI automated process on 2020-01-08
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance Medical
Sequencing Center Luxembourg Centre for Systems Biomedicine
Collaborating Institute
  
Funding Agency
  
Project Description
Metatranscriptome of fecal microbial communities from individual in Luxembourg Centre for Systems Biomedicine, Luxembourg  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid RNA
Sequencing Strategy
Metatranscriptome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX1670103  (Link to NCBI )
Experiment Title Multi-omics of human faecal sample: metatranscriptomics
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection cDNA
Library Name M04.5-V3-stool-metaT
Library Layout PAIRED
Library Instrument ILLUMINA_HI_SEQ_2500
PROJECT COMPOSITION
Study Fecal microbial communities from healthy and diabetic individuals in Luxembourg Centre for Systems Biomedicine, Luxembourg
Biosample Fecal microbial communities from individual in Luxembourg Centre for Systems Biomedicine, Luxembourg - M04.5-V3-stool
Analysis Projects Metatranscriptome of fecal microbial communities from individual in Luxembourg Centre for Systems Biomedicine, Luxembourg - M04.5-V3-stool
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) ILLUMINA_HI_SEQ_2500
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Fecal microbial communities from individual in Luxembourg Centre for Systems Biomedicine, Luxembourg - M04.5-V3-stool
Other Names (alias, synonyms, short names)
  
Sample Description
Fecal microbial communities from individual in Luxembourg Centre for Systems Biomedicine, Luxembourg  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Human  
Ecosystem Type
Digestive system  
Ecosystem Subtype
Large intestine  
Specific Ecosystem
Fecal  

 

 

  You are going to add the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  You are going to remove permissions for the following user to your project, biosample and study.

 

Contact Name/Email:

Do you want to continue?

 

 

  Changing the SP visibility will also change visibility on the following items:

 

Do you want to continue with this visibility change?

 

 

  Checking that this Sequencing Project can be made private:

 

Do you want to continue with this visibility change?

 

 

 

 

 

  Changing the SP Sequencing Strategy will also effect these items:

 

Do you want to continue with this Sequencing Strategy change?