PROJECT INFORMATION
GOLD Project ID
Gp0460415  
Project Name
Metatranscriptome of Leaf Surface microbial community from Fudan University, Shanghai, China - 6227043  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Metatranscriptome of Diverse samples microbial community from Shanghai, China
NCBI BioProject ID 361203
NCBI BioProject Accession PRJNA361203
NCBI Locus Tag
  
NCBI BioSample Accession SAMN06227043
PI
Added By JGI automated process on 2019-11-08
Last Modified By
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center Fudan University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Metatranscriptome of Diverse samples microbial community from Shanghai, China  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid RNA
Sequencing Strategy
Metatranscriptome  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX2488370  (Link to NCBI )
Experiment Title RNA-seq of leaf surface: Osmanthus fragrans leaf
Exp Library Strategy RNA_SEQ
Library Source METATRANSCRIPTOMIC
Library Selection RANDOM
Library Name LS
Library Layout PAIRED
Library Instrument ILLUMINA_MI_SEQ
PROJECT COMPOSITION
Study Diverse samples microbial community from Shanghai, China
Biosample Leaf Surface microbial community from Fudan University, Shanghai, China - 6227043
Analysis Projects Metatranscriptome of Leaf Surface microbial community from Fudan University, Shanghai, China - 6227043
Number of Analysis Projects (AP)
1  
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina MiSeq
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Leaf Surface microbial community from Fudan University, Shanghai, China - 6227043
Other Names (alias, synonyms, short names)
  
Sample Description
  
SAMPLE TAXONOMY
NCBI Taxonomy ID
GOLD CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Plants  
Ecosystem Type
Phyllosphere  
Ecosystem Subtype
Phylloplane/Leaf surface  
Specific Ecosystem
  

 

 

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