PROJECT INFORMATION
GOLD Project ID
Gp0452925  
Project Name
Swingsia samuiensis AH83  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Swingsia samuiensis strain:AH83T Genome sequencing
NCBI BioProject ID 528164
NCBI BioProject Accession PRJNA528164
NCBI Locus Tag
E3D00  
NCBI BioSample Accession SAMN11175157
PI Kah-Ooi Chua
Added By Kah-Ooi Chua on 2019-09-11
Last Modified By JGI automated process on 2019-09-18
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center UNIVERSITY OF MALAYA
Collaborating Institute
  
Funding Agency
  
Project Description
Genomes of type strains of Swingsia samuiensis  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Complete genome of Swingsia samuiensis AH83
Organism Swingsia samuiensis AH83
Analysis Projects Swingsia samuiensis AH83
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal Level 6: Finished
Sequencing Comments
High coverage  
Sequencing Technology (MIGS-29) PacBio Sequel
Library Method (MIGS-28)
PacBio 10kb  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
46  
Chromosome Count
1  
Plasmid Count
1  
ORGANISM NAME
GOLD Organism ID Go0526849
Organism Name
Swingsia samuiensis AH83  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
PROTEOBACTERIA-ALPHA  
Genus
Swingsia  
Genus Synonyms
  
Species
Swingsia samuiensis  
Subspecies
  
Species Synonyms
  
Strain
AH83  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
NBRC 107927  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
1  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 1293412
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Proteobacteria  
NCBI Class
Alphaproteobacteria  
NCBI Order
Rhodospirillales  
NCBI Family
Acetobacteraceae  
NCBI Genus
Swingsia  
NCBI Species
Swingsia samuiensis  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Terrestrial  
Ecosystem Type
Plant litter  
Ecosystem Subtype
Unclassified  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
Rod-shaped  
Motility
  
Sporulation
  
Temperature Range
Mesophile  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements Singles
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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