PROJECT INFORMATION
GOLD Project ID
Gp0443260  
Project Name
Xylanimonas allomyrinae 2JSPR-7  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Xylanimonas allomyrinae 2JSPR-7 genome sequencing
NCBI BioProject Accession PRJNA516960
NCBI Locus Tag
ET495  
NCBI BioSample Accession SAMN10817575
PI
Added By JGI automated process on 2019-08-14
Last Modified By Mahathi Kandimalla on 2020-06-08
Project Comments
  
Project Status
Complete and Published  
Project Relevance Agricultural
Sequencing Center National Institute of Agricultural Science
Collaborating Institute
  
Funding Agency
  
Project Description
Xylanibacterium sp. 2JSPR-7 genome sequencing  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
JGI Data Utilization Status
  
JGI Award DOI
Genome Publications International Journal of Systematic and Evolutionary Microbiology 70(3):1924-1930 .

Other Publications
  
Ignored Publications
  
Unassigned Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Xylanimonas allomyrinae 2JSPR-7 genome sequencing
Organism Xylanimonas allomyrinae 2JSPR-7
Analysis Projects Xylanimonas allomyrinae 2JSPR-7
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
Contamination Screening Input
  
DNA Amplification Method
  
Single Cell Lysis Protocol
  
Single Cell Lysis Approach
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) PacBio RS II
Library Method (MIGS-28)
  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
73  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0519124
Organism Name
Xylanimonas allomyrinae 2JSPR-7  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
BACTERIAL  
Phylogeny
ACTINOBACTERIA  
Genus
Xylanibacterium  
Genus Synonyms
  
Species
Xylanimonas allomyrinae  
Subspecies
  
Species Synonyms
  
Strain
2JSPR-7  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
KACC 19330  
Type Strain
Yes  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2509459
NCBI Superkingdom
Bacteria  
NCBI Kingdom
  
NCBI Phylum
Actinobacteria  
NCBI Class
Actinomycetia  
NCBI Order
Micrococcales  
NCBI Family
Promicromonosporaceae  
NCBI Genus
Xylanimonas  
NCBI Species
Xylanimonas allomyrinae  
ISOLATION CLASSIFICATION
Ecosystem
Host-associated  
Ecosystem Category
Arthropoda: Insects  
Ecosystem Type
Larva  
Ecosystem Subtype
Gut  
Specific Ecosystem
Unclassified  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID MK490998
GENERAL PROPERTIES
Oxygen Requirement
Facultative anaerobe  
Cell Shape
Rod-shaped  
Motility
Nonmotile  
Sporulation
  
Temperature Range
  
Salinity
Halotolerant  
pH
6.5  
Cell Diameter
0.6–0.8 µm  
Cell Length
1.0–10.0 µm  
Color
White  
Gram Staining
Gram+  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats Gut
Larva
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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