PROJECT INFORMATION
GOLD Project ID
Gp0434618  
Project Name
Haloprofundus sp. MHR1  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Haloprofundus sp. MHR1 Genome sequencing
NCBI BioProject ID 539857
NCBI BioProject Accession PRJNA539857
NCBI Locus Tag
  
NCBI BioSample Accession SAMN11514334
PI Luo Y
Added By Supratim Mukherjee on 2019-06-13
Last Modified By Supratim Mukherjee on 2019-06-13
Project Comments
  
Project Status
Complete and Published  
Project Relevance
  
Sequencing Center Nankai University (China)
Collaborating Institute
  
Funding Agency
  
Project Description
Whole genome sequence of Haloprofundus sp. strain MHR1 to explore genomic insights into the antibiotic resistant property  
Is JGI Project
No  
Project Information Visibility Public
PROJECT TYPE
Specimen Organism
Nucleic Acid DNA
Sequencing Strategy
Whole Genome Sequencing  
EXTERNAL PROJECT LINKS
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Whole genome sequencing of Haloprofundus sp. MHR1
Organism Haloprofundus sp. MHR1
Analysis Projects Haloprofundus sp. MHR1
Number of Analysis Projects 1
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 6: Finished
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) PacBio RS
Library Method (MIGS-28)
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
ORGANISM NAME
GOLD Organism ID Go0514968
Organism Name
Haloprofundus sp. MHR1  
Other names (alias, synonyms, short names, common names)
  
Organism Domain
ARCHAEAL  
Phylogeny
EURYARCHAEOTA-HALOBACTERIA  
Genus
Haloprofundus  
Genus Synonyms
  
Species
Haloprofundus sp. MHR1  
Subspecies
  
Species Synonyms
  
Strain
MHR1  
Strain Synonyms
  
Serovar/Cultivar
  
Culture Collection ID
  
Type Strain
  
Exemplar DOI
  
Exemplar Name
  
Taxon DOI
  
Biosafety Level
  
Organism Comments
  
Cultured
Yes  
Culture Type
Isolate  
Organism Type
Natural  
Uncultured Type
  
Commercial Strain
  
Commercial Strain Comments
  
ORGANISM TAXONOMY
NCBI Taxonomy ID 2572921
NCBI Superkingdom
Archaea  
NCBI Kingdom
  
NCBI Phylum
Euryarchaeota  
NCBI Class
Halobacteria  
NCBI Order
Haloferacales  
NCBI Family
Haloferacaceae  
NCBI Genus
Haloprofundus  
NCBI Species
Haloprofundus sp. MHR1  
ISOLATION CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Freshwater  
Ecosystem Subtype
Sediment  
Specific Ecosystem
  
ORGANISM EXTERNAL REFERENCES
Strain Info ID
Genbank 16S ID
GENERAL PROPERTIES
Oxygen Requirement
  
Cell Shape
  
Motility
  
Sporulation
  
Temperature Range
  
Salinity
  
pH
  
Cell Diameter
  
Cell Length
  
Color
  
Gram Staining
  
Biotic Relationships
  
Symbiotic Physical Interaction
  
Symbiotic Relationship
  
Symbiont Name
  
Symbiont Taxon ID
  
Cell Arrangements
  
Diseases
  
Known Habitats
  
Metabolisms
  
Phenotypes
  
Energy Sources
  

 

 

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