PROJECT INFORMATION
GOLD Project ID
Gp0432470  
Project Name
Hot spring water microbial communities from Norris-Mammoth Corridor, Yellowstone National Park, WY, United States - NMC.RSN_P  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name Hot spring water microbial communities from Norris-Mammoth Corridor, Yellowstone National Park, WY, United States - NMC.RSN_P
NCBI BioProject ID 620483
NCBI BioProject Accession PRJNA620483
NCBI Locus Tag
HDZ29  
NCBI BioSample Accession SAMN14511432
PI Daniel Colman
Added By JGI automated process on 2019-05-23
Last Modified By JGI automated process on 2020-04-03
Project Comments
  
Project Status
Permanent Draft  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Hot spring water microbial communities from Norris-Mammoth Corridor, Yellowstone National Park, WY, United States  
Is JGI Project
Yes  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid DNA
Sequencing Strategy
Metagenome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
 
SRA Experiment Id SRX8735304  (Link to NCBI )
Experiment Title NMC.RSN_P
Exp Library Strategy WGS
Library Source METAGENOMIC
Library Selection other
Library Name GOXHT
Library Layout PAIRED
PROJECT COMPOSITION
Study Hot spring microbial communities from different geyser basins in Yellowstone National Park, WY, United States
Biosample Hot spring water microbial communities from Norris-Mammoth Corridor, Yellowstone National Park, WY, United States - NMC.RSN_P
Analysis Projects Hot spring water microbial communities from Norris-Mammoth Corridor, Yellowstone National Park, WY, United States - NMC.RSN_P
Number of Analysis Projects (AP) 1
Number of Derived Analyis Projects (DAP)
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31) Level 1: Standard Draft
Finishing Goal Level 1: Standard Draft
Contamination Screening Input
  
DNA Amplification Method
  
Sorting Technology
  
Sequencing Comments
  
DNA Amplification Kit
  
Sequencing Technology (MIGS-29) Illumina NovaSeq
Library Method (MIGS-28)
Illumina Low Input Fragment, 300bp, Tubes; Illumina Regular Fragment, 300bp, Tubes  
Library Layout
  
Library Screening Method
  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Hot spring water microbial communities from Norris-Mammoth Corridor, Yellowstone National Park, WY, United States - NMC.RSN_P
Other Names (alias, synonyms, short names)
  
Sample Description
Hot spring water microbial communities from Norris-Mammoth Corridor, Yellowstone National Park, WY, United States  
SAMPLE TAXONOMY
NCBI Taxonomy ID 433727
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Thermal springs  
Ecosystem Subtype
  
Specific Ecosystem
  

 

 

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