PROJECT INFORMATION
GOLD Project ID
Gp0403327  
Project Name
Metatranscriptome of marine sediment microbial communities from Baltic Sea, Sweden - 16M  
Other Names
  
Legacy GOLD ID
  
NCBI BioProject Name
  
NCBI BioProject ID
NCBI BioProject Accession
NCBI Locus Tag
  
NCBI BioSample Accession
PI Samuel Hylander
Added By JGI automated process on 2019-04-12
Last Modified By JGI automated process on 2019-06-28
Project Comments
  
Project Status
incomplete  
Project Relevance
  
Sequencing Center DOE Joint Genome Institute (JGI) (USA)
Collaborating Institute
  
Funding Agency U.S. Department of Energy (DOE) (USA)
Project Description
Metatranscriptome of marine sediment microbial communities from Baltic Sea, Sweden, incubated at 16C for 7 days  
Is JGI Project
  
Project Information Visibility Public
PROJECT TYPE
Specimen Biome
Nucleic Acid RNA
Sequencing Strategy
Metatranscriptome  
EXTERNAL PROJECT LINKS
JGI Portal Download Raw Sequence Data
Project Information
  
Database
  
Genome Publications
  
Other Publications
  
SRA Experiment
  
PROJECT COMPOSITION
Study Marin sediment microbial communities from Baltic Sea, Sweden
Biosample Marine sediment microbial communities from Baltic Sea, Sweden - 16M
Analysis Projects Metatranscriptome of marine sediment microbial communities from Baltic Sea, Sweden - 16M (Metagenome Metatranscriptome)
Metatranscriptome of marine sediment microbial communities from Baltic Sea, Sweden - 16M (Metagenome Metatranscriptome Expression - Self)
Number of Analysis Projects 2
Number of DAPs
0  
SEQUENCING INFORMATION
Sequencing Status Complete
Sequencing Quality (MIGS-31)
Finishing Goal
  
Sequencing Comments
  
Sequencing Technology (MIGS-29) Illumina NovaSeq
Library Method (MIGS-28)
Illumina RNASeq w/rRNA Depletion, Plates  
Number Of Reads
  
Read Size
  
Vector
  
GC Percent
  
Chromosome Count
  
Plasmid Count
  
SAMPLE NAME
Sample Name Marine sediment microbial communities from Baltic Sea, Sweden - 16M
Other Names (alias, synonyms, short names)
  
Sample Description
Marine sediment microbial communities from Baltic Sea, Sweden, incubated at 16C for 7 days  
SAMPLE TAXONOMY
NCBI Taxonomy ID 749907
GOLD CLASSIFICATION
Ecosystem
Environmental  
Ecosystem Category
Aquatic  
Ecosystem Type
Marine  
Ecosystem Subtype
Coastal  
Specific Ecosystem
Sediment  

 

 

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